RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 JOSD1Q15040 202 aaPredicted RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 UAP1Q16222 522 aaPredicted RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 COQ5Q5HYK3 327 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 CCDC122Q5T0U0 273 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 COMMD7Q86VX2 200 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 C10orf67Q8IYJ2 551 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 OR4C16Q8NGL9 310 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 FNDC9Q8TBE3 224 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 EEF1AKMT1Q8WVE0 214 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 RAB8BQ92930 207 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 RMND5BQ96G75 393 aaPredicted RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 SLC35G5Q96KT7 338 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 SLC2A9Q9NRM0 540 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 TXNL4BQ9NX01 149 aaKnown RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 C3orf18Q9UK00 162 aa2.67□□□□□ -1.98
SMG1-204ENST00000561940 NYNRINQ9P2P1 1898 aaKnown RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 PRRC2CQ9Y520 2896 aaKnown RBP2.67□□□□□ -1.98
SMG1-204ENST00000561940 MEGF8Q7Z7M0 2845 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 MDFIC2A0A1B0GVS7 189 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 C17orf51A8MQB3 221 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 UBFD1O14562 309 aaKnown RBP2.66□□□□□ -1.98
SMG1-204ENST00000561940 CCL3P10147 92 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 CD200P41217 278 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 FAM78BQ5VT40 261 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 CD200R1LQ6Q8B3 271 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 BAP18Q8IXM2 172 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 PACRGLQ8N7B6 248 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 C16orf78Q8WTQ4 265 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 TMEM109Q9BVC6 243 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 ULBP3Q9BZM4 244 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 OR51I2Q9H344 312 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 BABAM2Q9NXR7 383 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 STOML2Q9UJZ1 356 aa2.66□□□□□ -1.98
SMG1-204ENST00000561940 UNC13CQ8NB66 2214 aa2.65□□□□□ -1.98
SMG1-204ENST00000561940 M0R036 132 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 SLC17A3O00476 420 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 DCTN3O75935 186 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 HLA-DRAP01903 254 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 CRHBPP24387 322 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 HES1Q14469 280 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 TMEM176BQ3YBM2 270 aaPredicted RBP2.65□□□□□ -1.99
SMG1-204ENST00000561940 CLVS2Q5SYC1 327 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 LGALS9CQ6DKI2 356 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 AMTNQ6UX39 209 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 PTH2Q96A98 100 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 KLF6Q99612 283 aaPredicted RBP2.65□□□□□ -1.99
SMG1-204ENST00000561940 TCEAL2Q9H3H9 227 aaPredicted RBP2.65□□□□□ -1.99
SMG1-204ENST00000561940 UBAP1Q9NZ09 502 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 MMACHCQ9Y4U1 282 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 AKAP6Q13023 2319 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 MYOFQ9NZM1 2061 aa2.65□□□□□ -1.99
SMG1-204ENST00000561940 TMED7-TICAM2A0A0A6YYA0 188 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 DISC1C4P0D8 188 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 UBE2L6O14933 153 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 TNFP01375 233 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 REG1AP05451 166 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 SAPCD1Q5SSQ6 148 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 LRRC34Q8IZ02 419 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 UBL4BQ8N7F7 174 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 TMEM161BQ8NDZ6 487 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 CT55Q8WUE5 264 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 KLK6Q92876 244 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 C12orf43Q96C57 262 aaKnown RBP2.64□□□□□ -1.99
SMG1-204ENST00000561940 INTS1Q8N201 2190 aaKnown RBP2.64□□□□□ -1.99
SMG1-204ENST00000561940 DENND4CQ5VZ89 1909 aa2.64□□□□□ -1.99
SMG1-204ENST00000561940 TRGV4A0A0C4DH28 118 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 IFNA5P01569 189 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 HLA-DQB2P05538 268 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 CALB1P05937 261 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 UCHL3P15374 230 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 CTBP2P56545 445 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 PLPPR5Q32ZL2 321 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 C2orf91Q6ZV80 131 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 HIST2H3AQ71DI3 136 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 RNASE6Q93091 150 aaKnown RBP2.63□□□□□ -1.99
SMG1-204ENST00000561940 NCKAP5O14513 1909 aa2.63□□□□□ -1.99
SMG1-204ENST00000561940 SCN8AQ9UQD0 1980 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 OR11H12B2RN74 326 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 KCNK1O00180 336 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 TGOLN2O43493 480 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 NDUFB2O95178 105 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 CA5AP35218 305 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 NKX2-5P52952 324 aaPredicted RBP2.62□□□□□ -1.99
SMG1-204ENST00000561940 CEBPGP53567 150 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 TFF3Q07654 80 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 RSU1Q15404 277 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 SS18Q15532 418 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 C1orf195Q5TG92 126 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 DAND5Q8N907 189 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 OR11H2Q8NH07 326 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 RPS4Y2Q8TD47 263 aa2.62□□□□□ -1.99
SMG1-204ENST00000561940 V9GYY5 206 aaPredicted RBP2.62□□□□□ -1.99
SMG1-204ENST00000561940 ZNF106Q9H2Y7 1883 aaKnown RBP2.61□□□□□ -1.99
SMG1-204ENST00000561940 OR6C6A6NF89 314 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 OR5K4A6NMS3 321 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 KPNA3O00505 521 aaPredicted RBP2.61□□□□□ -1.99
SMG1-204ENST00000561940 HCRTO43612 131 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 P0DMU3 169 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 FAM231AP0DMU4 169 aa2.61□□□□□ -1.99
SMG1-204ENST00000561940 FAM231CP0DMU5 169 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms