RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 AWAT2Q6E213 333 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 C16orf54Q6UWD8 224 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 Q6ZRN7 208 aaPredicted RBP3.65□□□□□ -1.83
HERC1-213ENST00000561359 C6orf201Q7Z4U5 140 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 CCDC190Q86UF4 302 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 VKORC1L1Q8N0U8 176 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 C9orf62Q8N4C0 152 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 CBR4Q8N4T8 237 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 JAGN1Q8N5M9 183 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 DMBX1Q8NFW5 382 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 STXBP6Q8NFX7 210 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 VN1R17PQ8TDU5 208 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 SCARB1Q8WTV0 552 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 CYGBQ8WWM9 190 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 ADTRPQ96IZ2 230 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 OR51E2Q9H255 320 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 RIBC2Q9H4K1 309 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 RDH8Q9NYR8 311 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 KLK9Q9UKQ9 250 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 RBM7Q9Y580 266 aaKnown RBP3.65□□□□□ -1.83
HERC1-213ENST00000561359 A0A075B6Q4 140 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 A0A087WTM6 91 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 IGHV3-66A0A0C4DH42 116 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 ZNF705FA8MVS1 300 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 FCGR3BO75015 233 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 KBTBD11O94819 623 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 GAS8-AS1O95177 125 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 NAPSAO96009 420 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 NPSP0C0P6 89 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 ZNF705DP0CH99 300 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 ZNF705BP0CI00 300 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 MYL9P24844 172 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 GPX4P36969 197 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 RFX2P48378 723 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 HLA-DRB3P79483 266 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 FGL1Q08830 312 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 Q56UQ5 140 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 SPANXN2Q5MJ10 180 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 OR2G6Q5TZ20 316 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 TTC23Q5W5X9 447 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 ZNF880Q6PDB4 577 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 ZNF705AQ6ZN79 300 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 NRARPQ7Z6K4 114 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 C8orf59Q8N0T1 100 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 VSTM2AQ8TAG5 236 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 GPR148Q8TDV2 347 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 SFT2D1Q8WV19 159 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 ORAI1Q96D31 301 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 LGALS12Q96DT0 336 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 RNF125Q96EQ8 232 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 C5orf30Q96GV9 206 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 UHRF2Q96PU4 802 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 RAB40CQ96S21 281 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 MAGT1Q9H0U3 335 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 RIMS4Q9H426 269 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 FAM212BQ9NTI7 297 aaPredicted RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 C21orf62Q9NYP8 219 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 COPZ2Q9P299 210 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 GHRLQ9UBU3 117 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 HSPB11Q9Y547 144 aa3.64□□□□□ -1.83
HERC1-213ENST00000561359 YTHDF2Q9Y5A9 579 aaKnown RBP3.64□□□□□ -1.83
HERC1-213ENST00000561359 IGLV5-52A0A0A0MRZ9 124 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 LOC102723971A0A1B0GUV8 181 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 L7N2F9 121 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 SULT1C2O00338 296 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 HBE1P02100 147 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 ALPLP05186 524 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 FCER2P06734 321 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 FGF2P09038 288 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 DEFB130BP0DP73 79 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 DEFB130AP0DP74 79 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 DUTP33316 252 aaKnown RBP3.63□□□□□ -1.83
HERC1-213ENST00000561359 RRAS2P62070 204 aaPredicted RBP3.63□□□□□ -1.83
HERC1-213ENST00000561359 RPL8P62917 257 aaKnown RBP3.63□□□□□ -1.83
HERC1-213ENST00000561359 ARFRP1Q13795 201 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 OR2B11Q5JQS5 317 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 SAPCD1Q5SSQ6 148 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 C12orf73Q69YU5 71 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 SLC25A24Q6NUK1 477 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 HSD17B13Q7Z5P4 300 aaPredicted RBP3.63□□□□□ -1.83
HERC1-213ENST00000561359 DHFR2Q86XF0 187 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 ACBD7Q8N6N7 88 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 RNASE11Q8TAA1 199 aaKnown RBP3.63□□□□□ -1.83
HERC1-213ENST00000561359 GGHQ92820 318 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 GRAMD2BQ96HH9 432 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 OR10C1Q96KK4 312 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 LINC00052Q96N35 136 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 SDHCQ99643 169 aaPredicted RBP3.63□□□□□ -1.83
HERC1-213ENST00000561359 GINS3Q9BRX5 216 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 HDHD3Q9BSH5 251 aaPredicted RBP3.63□□□□□ -1.83
HERC1-213ENST00000561359 PDCD10Q9BUL8 212 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 DCSTAMPQ9H295 470 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 MIXL1Q9H2W2 232 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 DUSP21Q9H596 190 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 PLCXD1Q9NUJ7 323 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 IMPAD1Q9NX62 359 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 CKLFQ9UBR5 152 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 MGAT4AQ9UM21 535 aa3.63□□□□□ -1.83
HERC1-213ENST00000561359 A0A087WWL8 130 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms