RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 SNX29P2Q8IUI4 249 aa11.21□□□□□ -0.61
AC243562.3-201ENST00000559866 ZNF486Q96H40 463 aaPredicted RBP11.21□□□□□ -0.61
AC243562.3-201ENST00000559866 TBC1D24Q9ULP9 559 aa11.21□□□□□ -0.61
AC243562.3-201ENST00000559866 HELTA6NFD8 242 aa11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 CLN5O75503 358 aa11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 TRIM16LQ309B1 348 aa11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 ACTL10Q5JWF8 245 aa11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 RABL2AQ9UBK7 228 aaPredicted RBP11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 EXTL2Q9UBQ6 330 aa11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 RABL2BQ9UNT1 228 aa11.2□□□□□ -0.62
AC243562.3-201ENST00000559866 TRAV30A0A087WSZ9 112 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 RPS10-NUDT3A0A1W2PQS6 291 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 KNCNA6PVL3 124 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 CD74P04233 296 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 RNASE2P10153 161 aaKnown RBP11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 CRYBB3P26998 211 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 RND3P61587 244 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 Q6ZRM9 215 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 CSNK1G2-AS1Q8NCQ2 148 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 OR4X1Q8NH49 305 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 C1QTNF4Q9BXJ3 329 aa11.19□□□□□ -0.62
AC243562.3-201ENST00000559866 IGKV1-5P01602 117 aa11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 PPP5CP53041 499 aa11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 AP2S1P53680 142 aaPredicted RBP11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 PIGPP57054 158 aa11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 NUTF2P61970 127 aaKnown RBP11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 DHRS2Q13268 280 aa11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 RNASE10Q5GAN6 216 aaKnown RBP11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 CCDC71LQ8N9Z2 235 aa11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 MCFD2Q8NI22 146 aa11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 RRNAD1Q96FB5 475 aaKnown RBP11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 NDUFAF3Q9BU61 184 aa11.18□□□□□ -0.62
AC243562.3-201ENST00000559866 A0A0B4J293 547 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 C3orf85A0A1B0GTC6 90 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 M0QYG6 137 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 CTDSP2O14595 271 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 ETV6P41212 452 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 MRPS10P82664 201 aaKnown RBP11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 ARRDC1Q8N5I2 433 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 DCANP1Q8TF63 244 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 MIXL1Q9H2W2 232 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 COPZ2Q9P299 210 aa11.17□□□□□ -0.62
AC243562.3-201ENST00000559866 CDK2AP2O75956 126 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 HNRNPCP07910 306 aaKnown RBP eCLIP11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 PI3P19957 117 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 NPY1RP25929 384 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 SNRPD3P62318 126 aaKnown RBP11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 TIGITQ495A1 244 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 PSMG4Q5JS54 123 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 OR1S2Q8NGQ3 325 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 Q8WTZ3 238 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 DIRAS2Q96HU8 199 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 TP53RKQ96S44 253 aa11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 FNDC4Q9H6D8 234 aaPredicted RBP11.16□□□□□ -0.62
AC243562.3-201ENST00000559866 B3GALNT1O75752 331 aa11.15□□□□□ -0.62
AC243562.3-201ENST00000559866 P0C879 139 aa11.15□□□□□ -0.62
AC243562.3-201ENST00000559866 HTR2BP41595 481 aa11.15□□□□□ -0.62
AC243562.3-201ENST00000559866 TNP2Q05952 138 aa11.15□□□□□ -0.62
AC243562.3-201ENST00000559866 RNASE12Q5GAN4 147 aaKnown RBP11.15□□□□□ -0.62
AC243562.3-201ENST00000559866 ZFAND1Q8TCF1 268 aa11.15□□□□□ -0.62
AC243562.3-201ENST00000559866 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
AC243562.3-201ENST00000559866 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
AC243562.3-201ENST00000559866 SLC25A4P12235 298 aa11.14□□□□□ -0.63
AC243562.3-201ENST00000559866 TBPP20226 339 aa11.14□□□□□ -0.63
AC243562.3-201ENST00000559866 S100A5P33763 92 aa11.14□□□□□ -0.63
AC243562.3-201ENST00000559866 SSBP1Q04837 148 aaKnown RBP11.14□□□□□ -0.63
AC243562.3-201ENST00000559866 RAB40CQ96S21 281 aa11.14□□□□□ -0.63
AC243562.3-201ENST00000559866 ABHD1Q96SE0 405 aa11.14□□□□□ -0.63
AC243562.3-201ENST00000559866 GABARAPH6UMI1 98 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 CTDSPLO15194 276 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 GSTZ1O43708 216 aaPredicted RBP11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 IFNA10P01566 189 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 IGKV1-17P01599 117 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 SPCS3P61009 180 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 IL18Q14116 193 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 BSXQ3C1V8 233 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 C16orf54Q6UWD8 224 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 LHFPL1Q86WI0 220 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 FAM219AQ8IW50 185 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 UBE2DNLQ8IWF7 75 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 Q8N1X5 172 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 HEYLQ9NQ87 328 aaPredicted RBP11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 MTFP1Q9UDX5 166 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 DNAH5Q8TE73 4624 aa11.13□□□□□ -0.63
AC243562.3-201ENST00000559866 FABP12A6NFH5 140 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 IL4P05112 153 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 UCP1P25874 307 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 OR10J1P30954 320 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 TNFSF8P32971 234 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 RND2P52198 227 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 MLANAQ16655 118 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 SP6Q3SY56 376 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 SCGB2B2Q4G0G5 96 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 ETFRF1Q6IPR1 90 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 OR52E5Q8NH55 327 aa11.12□□□□□ -0.63
AC243562.3-201ENST00000559866 OR52I2Q8NH67 350 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms