RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 Q8WTZ3 238 aa8.22□□□□□ -1.09
GABRB3-213ENST00000557765 FAM103A1Q9BTL3 118 aaKnown RBP8.22□□□□□ -1.09
GABRB3-213ENST00000557765 GGTLC1Q9BX51 225 aa8.22□□□□□ -1.09
GABRB3-213ENST00000557765 SMIM3Q9BZL3 60 aa8.22□□□□□ -1.09
GABRB3-213ENST00000557765 FNDC4Q9H6D8 234 aaPredicted RBP8.22□□□□□ -1.09
GABRB3-213ENST00000557765 TNFRSF19Q9NS68 423 aa8.22□□□□□ -1.09
GABRB3-213ENST00000557765 ARL2-SNX15V9GYD0 113 aa8.22□□□□□ -1.09
GABRB3-213ENST00000557765 TET2Q6N021 2002 aaPredicted RBP8.21□□□□□ -1.1
GABRB3-213ENST00000557765 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.21□□□□□ -1.1
GABRB3-213ENST00000557765 SEC14L6B5MCN3 397 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 INAFM1C9JVW0 142 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 CD5P06127 495 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 MEOX2P50222 304 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 RND2P52198 227 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 MFAP2P55001 183 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 B2MP61769 119 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 RHOBP62745 196 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 FOXL1Q12952 345 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 FBLN7Q53RD9 439 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 ZNF343Q6P1L6 599 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 ZNF600Q6ZNG1 722 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 CYP2G1PQ6ZSU1 146 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 HSD17B11Q8NBQ5 300 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 OR5T1Q8NG75 326 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 OR51G1Q8NGK1 321 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 NPIPB3Q92617 1050 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 RBMXL1Q96E39 390 aaKnown RBP8.21□□□□□ -1.1
GABRB3-213ENST00000557765 GPR82Q96P67 336 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 TXNDC17Q9BRA2 123 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 WFDC1Q9HC57 220 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 ZNF355PQ9NSJ1 428 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 SLC39A9Q9NUM3 307 aa8.21□□□□□ -1.1
GABRB3-213ENST00000557765 VPS13CQ709C8 3753 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 TLN2Q9Y4G6 2542 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 BMPR1BO00238 502 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 REG1AP05451 166 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 RD3LP0DJH9 198 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 ELLP55199 621 aaPredicted RBP8.2□□□□□ -1.1
GABRB3-213ENST00000557765 TPPP2P59282 170 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 ZNF616Q08AN1 781 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 SAMD13Q5VXD3 122 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 Q6ZSV7 163 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 IL17RELQ6ZVW7 336 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 LYPD6BQ8NI32 183 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 TMED6Q8WW62 240 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 ACY3Q96HD9 319 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 NKX6-2Q9C056 277 aaPredicted RBP8.2□□□□□ -1.1
GABRB3-213ENST00000557765 ACTR3CQ9C0K3 210 aaPredicted RBP8.2□□□□□ -1.1
GABRB3-213ENST00000557765 SERTAD4Q9NUC0 356 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 DMRT1Q9Y5R6 373 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 PXMP4Q9Y6I8 212 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 CSMD1Q96PZ7 3565 aa8.2□□□□□ -1.1
GABRB3-213ENST00000557765 CTXND1A0A1B0GTU2 59 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 A0A1W2PPV4 95 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 CLPSL1A2RUU4 121 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 G3V318 75 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 NDUFA4O00483 81 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 TGOLN2O43493 480 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 OR2J3O76001 311 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 PRH1P02810 166 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 PF4V1P10720 104 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 ZP3P21754 424 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 Q56UQ5 140 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 C1orf194Q5T5A4 169 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 PQLC2Q6ZP29 291 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 KLHDC1Q8N7A1 406 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 STPG3Q8N7X2 389 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 WIPF2Q8TF74 440 aaPredicted RBP8.19□□□□□ -1.1
GABRB3-213ENST00000557765 MBD3L1Q8WWY6 194 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 NARS2Q96I59 477 aaKnown RBP8.19□□□□□ -1.1
GABRB3-213ENST00000557765 MGST2Q99735 147 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 SMR3AQ99954 134 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 TCEAL7Q9BRU2 100 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 PBDC1Q9BVG4 233 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 DNAJC4Q9NNZ3 241 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 ESM1Q9NQ30 184 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 SOX21Q9Y651 276 aaPredicted RBP8.19□□□□□ -1.1
GABRB3-213ENST00000557765 NSD1Q96L73 2696 aaPredicted RBP8.19□□□□□ -1.1
GABRB3-213ENST00000557765 ACANP16112 2415 aa8.19□□□□□ -1.1
GABRB3-213ENST00000557765 A0A1W2PS18 150 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 K7EMT4 169 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 GGCTO75223 188 aaKnown RBP8.18□□□□□ -1.1
GABRB3-213ENST00000557765 IGKV1-17P01599 117 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 CTSGP08311 255 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 OR5G3P0C626 314 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 PSMB3P49720 205 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 FAM106AQ4KMX7 169 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 FFAR4Q5NUL3 377 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 IL34Q6ZMJ4 242 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 GPHB5Q86YW7 130 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 ZNF491Q8N8L2 437 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 C4orf3Q8WVX3 66 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 TMEM231Q9H6L2 316 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 CLEC5AQ9NY25 188 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 BOLA1Q9Y3E2 137 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 HIVEP1P15822 2718 aa8.18□□□□□ -1.1
GABRB3-213ENST00000557765 IGKV1OR2-108A0A075B7D4 117 aa8.17□□□□□ -1.1
GABRB3-213ENST00000557765 LINC01548A6NM66 108 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms