RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 RTBDNQ9BSG5 229 aaPredicted RBP5.3□□□□□ -1.56
PCNX1-213ENST00000556846 MS4A6AQ9H2W1 248 aa5.3□□□□□ -1.56
PCNX1-213ENST00000556846 NAA60Q9H7X0 242 aa5.3□□□□□ -1.56
PCNX1-213ENST00000556846 MCUBQ9NWR8 336 aa5.3□□□□□ -1.56
PCNX1-213ENST00000556846 RABL2AQ9UBK7 228 aaPredicted RBP5.3□□□□□ -1.56
PCNX1-213ENST00000556846 CACNG5Q9UF02 275 aa5.3□□□□□ -1.56
PCNX1-213ENST00000556846 RABL2BQ9UNT1 228 aa5.3□□□□□ -1.56
PCNX1-213ENST00000556846 KLK5Q9Y337 293 aaPredicted RBP5.3□□□□□ -1.56
PCNX1-213ENST00000556846 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
PCNX1-213ENST00000556846 NXPH3O95157 252 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 CA1P00915 261 aaPredicted RBP5.29□□□□□ -1.56
PCNX1-213ENST00000556846 IFNA4P05014 189 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 P0C879 139 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 AKR1C4P17516 323 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 RPL5P46777 297 aaKnown RBP5.29□□□□□ -1.56
PCNX1-213ENST00000556846 ALDH3B2P48448 385 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 EIF2B2P49770 351 aaKnown RBP5.29□□□□□ -1.56
PCNX1-213ENST00000556846 TMBIM6P55061 237 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 TMEM187Q14656 261 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 TIGITQ495A1 244 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 LEMD1Q68G75 181 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 ETFRF1Q6IPR1 90 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 Q6ZRM9 215 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 NOXA1Q86UR1 476 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 STHQ8IWL8 128 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 OR51S1Q8NGJ8 323 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 OR4C16Q8NGL9 310 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 OR11H2Q8NH07 326 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 GLYATL2Q8WU03 294 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 RAB2BQ8WUD1 216 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 GATAD1Q8WUU5 269 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 SMIM4Q8WVI0 70 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 GPR146Q96CH1 333 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 FNDC4Q9H6D8 234 aaPredicted RBP5.29□□□□□ -1.56
PCNX1-213ENST00000556846 VSIRQ9H7M9 311 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 CACFD1Q9UGQ2 172 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 RSL24D1Q9UHA3 163 aaKnown RBP5.29□□□□□ -1.56
PCNX1-213ENST00000556846 SCP2D1Q9UJQ7 156 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 GPR132Q9UNW8 380 aa5.29□□□□□ -1.56
PCNX1-213ENST00000556846 STAB2Q8WWQ8 2551 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 KMT2CQ8NEZ4 4911 aaKnown RBP5.28□□□□□ -1.56
PCNX1-213ENST00000556846 HELTA6NFD8 242 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 FABP12A6NFH5 140 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 CRYM-AS1A6NIL9 109 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 CTDSPLO15194 276 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 IFNA10P01566 189 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 SLC25A4P12235 298 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 ANXA3P12429 323 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 P2RY1P47900 373 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 RND2P52198 227 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 AP2S1P53680 142 aaPredicted RBP5.28□□□□□ -1.56
PCNX1-213ENST00000556846 EWSR1Q01844 656 aaKnown RBP eCLIP5.28□□□□□ -1.56
PCNX1-213ENST00000556846 DHRS2Q13268 280 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 PVRIGQ6DKI7 326 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 CENPSQ8N2Z9 138 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 SLC24A4Q8NFF2 622 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 OR1S2Q8NGQ3 325 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 LHFPL5Q8TAF8 219 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 C11orf45Q8TAV5 145 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 RNASEH2CQ8TDP1 164 aaKnown RBP5.28□□□□□ -1.56
PCNX1-213ENST00000556846 ACY3Q96HD9 319 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 ZNF414Q96IQ9 312 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 CCDC59Q9P031 241 aaKnown RBP5.28□□□□□ -1.56
PCNX1-213ENST00000556846 MRPL36Q9P0J6 103 aaKnown RBP5.28□□□□□ -1.56
PCNX1-213ENST00000556846 FBXL17Q9UF56 701 aa5.28□□□□□ -1.56
PCNX1-213ENST00000556846 TRAV2A0A0B4J234 112 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 CCDC160A6NGH7 325 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 DEFB4AO15263 64 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 HNRNPCP07910 306 aaKnown RBP eCLIP5.27□□□□□ -1.57
PCNX1-213ENST00000556846 ZNF688P0C7X2 276 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 RD3LP0DJH9 198 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 SULT1A3P0DMM9 295 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 SULT1A4P0DMN0 295 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 ATF4P18848 351 aaPredicted RBP5.27□□□□□ -1.57
PCNX1-213ENST00000556846 NPY1RP25929 384 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 CRYBB3P26998 211 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 OR10J1P30954 320 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 TNFSF8P32971 234 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 CCR6P51684 374 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 RBMS2Q15434 407 aaKnown RBP5.27□□□□□ -1.57
PCNX1-213ENST00000556846 BSXQ3C1V8 233 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 C2orf83Q53S99 150 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 PRSS54Q6PEW0 395 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 OR1S1Q8NH92 325 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 MCFD2Q8NI22 146 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 DYNC2LI1Q8TCX1 351 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 PHLDA1Q8WV24 401 aaPredicted RBP5.27□□□□□ -1.57
PCNX1-213ENST00000556846 LINC00476Q8WZB0 136 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 NPIPB3Q92617 1050 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 BCL7BQ9BQE9 202 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 MFFQ9GZY8 342 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 PRR13Q9NZ81 148 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 TMEM56-RWDD3S4R434 201 aa5.27□□□□□ -1.57
PCNX1-213ENST00000556846 PIGBOS1A0A0B4J2F0 54 aa5.26□□□□□ -1.57
PCNX1-213ENST00000556846 ANKRD20A5PA0PJZ0 165 aa5.26□□□□□ -1.57
PCNX1-213ENST00000556846 KNCNA6PVL3 124 aa5.26□□□□□ -1.57
PCNX1-213ENST00000556846 K7EQG2 157 aa5.26□□□□□ -1.57
PCNX1-213ENST00000556846 GSTZ1O43708 216 aaPredicted RBP5.26□□□□□ -1.57
PCNX1-213ENST00000556846 IGKV1-17P01599 117 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms