RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR52E5Q8NH55 327 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 GLYATL2Q8WU03 294 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 RTBDNQ9BSG5 229 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-222ENST00000556768 RHPN1-AS1Q9BWJ2 59 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 TMEM231Q9H6L2 316 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 PPP1R14DQ9NXH3 145 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 SMPXQ9UHP9 88 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 TRAV30A0A087WSZ9 112 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 IGHV7-4-1A0A0J9YVY3 117 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 A0A1W2PS18 150 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 ANKRD20A5PA0PJZ0 165 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 CEBPZOSA8MTT3 80 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 H3BMQ9 156 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 DNASE2O00115 360 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-222ENST00000556768 UBE2CO00762 179 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 GSTZ1O43708 216 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-222ENST00000556768 IGHV3-48P01763 117 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 TNFSF8P32971 234 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 SRPXP78539 464 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 PYDC2Q56P42 97 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 TMEM230Q96A57 120 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 OR10C1Q96KK4 312 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 FAM110AQ9BQ89 295 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 WFDC10AQ9H1F0 79 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 EDA2RQ9HAV5 297 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 GPR132Q9UNW8 380 aa5.48□□□□□ -1.53
SCFD1-222ENST00000556768 CRYM-AS1A6NIL9 109 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 SULT1A3P0DMM9 295 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 SULT1A4P0DMN0 295 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 AKR1C4P17516 323 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 NPPCP23582 126 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 EIF2B2P49770 351 aaKnown RBP5.47□□□□□ -1.53
SCFD1-222ENST00000556768 FAM90A2PQ658T7 463 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 ZFAND6Q6FIF0 208 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 ETFRF1Q6IPR1 90 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 ZNF600Q6ZNG1 722 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 TOMM5Q8N4H5 51 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 IL22RA2Q969J5 263 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 METTL26Q96S19 204 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 RNF2Q99496 336 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 NEU1Q99519 415 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 SLIRPQ9GZT3 109 aaKnown RBP5.47□□□□□ -1.53
SCFD1-222ENST00000556768 CACNG5Q9UF02 275 aa5.47□□□□□ -1.53
SCFD1-222ENST00000556768 IGKV3-7A0A075B6H7 116 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 CHEK1O14757 476 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 TMEM50AO95807 157 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 P0C879 139 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 SLC25A4P12235 298 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 TFPI2P48307 235 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 INPP1P49441 399 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 TIRAPP58753 221 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 SPANXN2Q5MJ10 180 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 TOMM20LQ6UXN7 152 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 Q6ZWC4 215 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 SELENOHQ8IZQ5 122 aaKnown RBP5.46□□□□□ -1.53
SCFD1-222ENST00000556768 OR4X1Q8NH49 305 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 RNASEH2CQ8TDP1 164 aaKnown RBP5.46□□□□□ -1.53
SCFD1-222ENST00000556768 DEDD2Q8WXF8 326 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 GALNT14Q96FL9 552 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 GRAMD2BQ96HH9 432 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 UBQLN2Q9UHD9 624 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 PUS1Q9Y606 427 aaKnown RBP eCLIP5.46□□□□□ -1.53
SCFD1-222ENST00000556768 TMEM56-RWDD3S4R434 201 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 U3KQ87 197 aa5.46□□□□□ -1.53
SCFD1-222ENST00000556768 IGHV3-49A0A0A0MS15 119 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 A0A0B4J2A0 478 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 KIR2DL5BA0A0G2JN68 375 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 KIR2DL5BA0A0G2JPC4 375 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 GAGE10A6NGK3 116 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 CLN5O75503 358 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 IFNA10P01566 189 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 RNASE2P10153 161 aaKnown RBP5.46□□□□□ -1.54
SCFD1-222ENST00000556768 CCR6P51684 374 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 Q6ZRM9 215 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 TCF24Q7RTU0 167 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 KIR2DL5AQ8N109 375 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 LGI3Q8N145 548 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 TMEM217Q8N7C4 229 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 SLC24A4Q8NFF2 622 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 KIR2DL5BQ8NHK3 375 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 Q8WTZ3 238 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 ST8SIA2Q92186 375 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 SLC25A21Q9BQT8 299 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-222ENST00000556768 SHPKQ9UHJ6 478 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 TP53TG1Q9Y2A0 90 aa5.46□□□□□ -1.54
SCFD1-222ENST00000556768 TENM2Q9NT68 2774 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 RYR3Q15413 4870 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 IGHV3OR16-13A0A075B7E8 117 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 IGHV3-74A0A0B4J1X5 117 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 SPRY2O43597 315 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 AP2S1P53680 142 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-222ENST00000556768 ATP5IP56385 69 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-222ENST00000556768 AARDQ4LEZ3 155 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 C2orf83Q53S99 150 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 TMEM128Q5BJH2 165 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 TMED4Q7Z7H5 227 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 GBGT1Q8N5D6 347 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 NPIPB3Q92617 1050 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 GPR146Q96CH1 333 aa5.45□□□□□ -1.54
SCFD1-222ENST00000556768 RETNQ9HD89 108 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms