RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 PRR20AP86496 221 aa13.66□□□□□ -0.22
CDKN3-209ENST00000556102 RBMY1FQ15415 496 aaKnown RBP13.66□□□□□ -0.22
CDKN3-209ENST00000556102 LHFPL5Q8TAF8 219 aa13.66□□□□□ -0.22
CDKN3-209ENST00000556102 GLYATL2Q8WU03 294 aa13.66□□□□□ -0.22
CDKN3-209ENST00000556102 RBPMSQ93062 196 aaKnown RBP13.66□□□□□ -0.22
CDKN3-209ENST00000556102 HEYLQ9NQ87 328 aaPredicted RBP13.66□□□□□ -0.22
CDKN3-209ENST00000556102 APLNQ9ULZ1 77 aa13.66□□□□□ -0.22
CDKN3-209ENST00000556102 TEX13DA0A0J9YY54 714 aaPredicted RBP13.65□□□□□ -0.22
CDKN3-209ENST00000556102 HELTA6NFD8 242 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 SLC25A4P12235 298 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 RND2P52198 227 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 MRPS10P82664 201 aaKnown RBP13.65□□□□□ -0.22
CDKN3-209ENST00000556102 SSBP1Q04837 148 aaKnown RBP13.65□□□□□ -0.22
CDKN3-209ENST00000556102 MEF2DQ14814 521 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 C2orf83Q53S99 150 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 ACTL10Q5JWF8 245 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 PRSS54Q6PEW0 395 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 RNASEH2CQ8TDP1 164 aaKnown RBP13.65□□□□□ -0.22
CDKN3-209ENST00000556102 Q8WTZ3 238 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 GLMPQ8WWB7 406 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 RTBDNQ9BSG5 229 aaPredicted RBP13.65□□□□□ -0.22
CDKN3-209ENST00000556102 NAA60Q9H7X0 242 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 CACNG5Q9UF02 275 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 X6R8D5 127 aa13.65□□□□□ -0.22
CDKN3-209ENST00000556102 HECTD4Q9Y4D8 3996 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDKN3-209ENST00000556102 HLA-DMBP28068 263 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 OR10J1P30954 320 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 YPEL3P61236 119 aaPredicted RBP13.64□□□□□ -0.23
CDKN3-209ENST00000556102 DHODHQ02127 395 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 DHRS2Q13268 280 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 SURF2Q15527 256 aaPredicted RBP13.64□□□□□ -0.23
CDKN3-209ENST00000556102 FAAP20Q6NZ36 180 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 C16orf54Q6UWD8 224 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 SELENOHQ8IZQ5 122 aaKnown RBP13.64□□□□□ -0.23
CDKN3-209ENST00000556102 SLC24A4Q8NFF2 622 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 MIXL1Q9H2W2 232 aa13.64□□□□□ -0.23
CDKN3-209ENST00000556102 AP2S1P53680 142 aaPredicted RBP13.63□□□□□ -0.23
CDKN3-209ENST00000556102 GPR107Q5VW38 600 aa13.63□□□□□ -0.23
CDKN3-209ENST00000556102 GPR146Q96CH1 333 aa13.63□□□□□ -0.23
CDKN3-209ENST00000556102 TRAV10A0A0B4J240 114 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 DISC1C4P0D8 188 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 SMIM18P0DKX4 95 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 PSMG4Q5JS54 123 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 TMEM268Q5VZI3 342 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 ETFRF1Q6IPR1 90 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 Q6ZTC4 211 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 CENPSQ8N2Z9 138 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 CSNK1G2-AS1Q8NCQ2 148 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 TMEM170AQ8WVE7 144 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 RAB40CQ96S21 281 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 CLEC5AQ9NY25 188 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 TBC1D24Q9ULP9 559 aa13.62□□□□□ -0.23
CDKN3-209ENST00000556102 ELOA3CA0A087WX78 387 aaPredicted RBP13.61□□□□□ -0.23
CDKN3-209ENST00000556102 CRYM-AS1A6NIL9 109 aa13.61□□□□□ -0.23
CDKN3-209ENST00000556102 RGS5O15539 181 aa13.61□□□□□ -0.23
CDKN3-209ENST00000556102 IL4P05112 153 aa13.61□□□□□ -0.23
CDKN3-209ENST00000556102 USF2Q15853 346 aaPredicted RBP13.61□□□□□ -0.23
CDKN3-209ENST00000556102 SMIM4Q8WVI0 70 aa13.61□□□□□ -0.23
CDKN3-209ENST00000556102 SEPSECSQ9HD40 501 aaKnown RBP13.61□□□□□ -0.23
CDKN3-209ENST00000556102 CACFD1Q9UGQ2 172 aa13.61□□□□□ -0.23
CDKN3-209ENST00000556102 GPR132Q9UNW8 380 aa13.61□□□□□ -0.23
CDKN3-209ENST00000556102 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
CDKN3-209ENST00000556102 AKAIN1P0CW23 69 aa13.6□□□□□ -0.23
CDKN3-209ENST00000556102 NPY1RP25929 384 aa13.6□□□□□ -0.23
CDKN3-209ENST00000556102 NOXA1Q86UR1 476 aa13.6□□□□□ -0.23
CDKN3-209ENST00000556102 OR4C16Q8NGL9 310 aa13.6□□□□□ -0.23
CDKN3-209ENST00000556102 TMEM56-RWDD3S4R434 201 aa13.6□□□□□ -0.23
CDKN3-209ENST00000556102 IGHV4-4A0A075B6R2 117 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 CTDSP2O14595 271 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 GSTZ1O43708 216 aaPredicted RBP13.59□□□□□ -0.23
CDKN3-209ENST00000556102 TOMM40O96008 361 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 SNRPD3P62318 126 aaKnown RBP13.59□□□□□ -0.23
CDKN3-209ENST00000556102 NPIPB3Q92617 1050 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 IL22RA2Q969J5 263 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 ACY3Q96HD9 319 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 C1QTNF4Q9BXJ3 329 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 KRTAP17-1Q9BYP8 105 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 NRN1Q9NPD7 142 aa13.59□□□□□ -0.23
CDKN3-209ENST00000556102 BUB3O43684 328 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 NXPH3O95157 252 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 RD3LP0DJH9 198 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 SULT1A3P0DMM9 295 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 SULT1A4P0DMN0 295 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 NUTF2P61970 127 aaKnown RBP13.58□□□□□ -0.24
CDKN3-209ENST00000556102 NMSQ5H8A3 153 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 SIGLEC15Q6ZMC9 328 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 PRRT1Q99946 306 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 RNF126Q9BV68 326 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 CELA1Q9UNI1 258 aa13.58□□□□□ -0.24
CDKN3-209ENST00000556102 CTDSPLO15194 276 aa13.57□□□□□ -0.24
CDKN3-209ENST00000556102 OR51S1Q8NGJ8 323 aa13.57□□□□□ -0.24
CDKN3-209ENST00000556102 RABL2AQ9UBK7 228 aaPredicted RBP13.57□□□□□ -0.24
CDKN3-209ENST00000556102 RABL2BQ9UNT1 228 aa13.57□□□□□ -0.24
CDKN3-209ENST00000556102 KCNIP3Q9Y2W7 256 aa13.57□□□□□ -0.24
CDKN3-209ENST00000556102 H3BMM0 161 aa13.56□□□□□ -0.24
CDKN3-209ENST00000556102 IFNA10P01566 189 aa13.56□□□□□ -0.24
CDKN3-209ENST00000556102 PSG1P11464 419 aa13.56□□□□□ -0.24
CDKN3-209ENST00000556102 NUP62P37198 522 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms