RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SERPINE2P07093 398 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CTSDP07339 412 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CD7P09564 240 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 C8orf88P0DMB2 117 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 PGAM2P15259 253 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 S100GP29377 79 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 FCGR2BP31994 310 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TMBIM6P55061 237 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 PIGPP57054 158 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TAS2R19P59542 299 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TSPAN5P62079 268 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 MRPS10P82664 201 aaKnown RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 PRCDQ00LT1 54 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 HAGHQ16775 308 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 RNASE10Q5GAN6 216 aaKnown RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 FAAP20Q6NZ36 180 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 LPCAT3Q6P1A2 487 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 BTNL8Q6UX41 500 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 LINC00322Q6ZN03 302 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 HSD17B13Q7Z5P4 300 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 GTSCR1Q86UQ5 136 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CLVS1Q8IUQ0 354 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM61Q8N0U2 210 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 OR13C8Q8NGS7 320 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 OR1P1Q8NH06 330 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 OR5B3Q8NH48 314 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 DYNC2LI1Q8TCX1 351 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 VN1R17PQ8TDU5 208 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 RAB2BQ8WUD1 216 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 SMIM4Q8WVI0 70 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TMEM190Q8WZ59 177 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 ISOC1Q96CN7 298 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF486Q96H40 463 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 CXorf58Q96LI9 332 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TP53RKQ96S44 253 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 ATP6V0BQ99437 205 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TSC22D3Q99576 134 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 SOSTQ9BQB4 213 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 NEURL2Q9BR09 285 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 HINT2Q9BX68 163 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 ZNF436Q9C0F3 470 aaPredicted RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 SLIRPQ9GZT3 109 aaKnown RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 NXF2Q9GZY0 626 aaKnown RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 EDA2RQ9HAV5 297 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 PLEKHA3Q9HB20 300 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 C21orf62Q9NYP8 219 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 TECRQ9NZ01 308 aaKnown RBP3.09□□□□□ -1.91
VTI1B-203ENST00000554636 PRNDQ9UKY0 176 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 SELENOKQ9Y6D0 94 aa3.09□□□□□ -1.91
VTI1B-203ENST00000554636 EPPK1P58107 5090 aaKnown RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 IGHV3-35A0A0C4DH35 117 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 A0A1W2PS18 150 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 RBMY1BA6NDE4 496 aaKnown RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 RBMY1EA6NEQ0 496 aaKnown RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 GAGE10A6NGK3 116 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 OR2T8A6NH00 312 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 INS-IGF2F8WCM5 200 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 H3BMQ9 156 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 C3orf84H3BNL1 204 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 I3L2K1 104 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 VCYO14598 125 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 TSPAN4O14817 238 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 ST8SIA3O43173 380 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 GSTZ1O43708 216 aaPredicted RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 RAB3DO95716 219 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 IFNA6P05013 189 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 RBMY1DP0C7P1 496 aaKnown RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 CBLN1P23435 193 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 UCP1P25874 307 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 CD81P60033 236 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 HSPE1P61604 102 aaKnown RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 SSBP1Q04837 148 aaKnown RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 SP6Q3SY56 376 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 SCGB2B2Q4G0G5 96 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 FAM106AQ4KMX7 169 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 SPINK9Q5DT21 86 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 GGNBP1Q5YKI7 109 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 ZNF57Q68EA5 555 aaPredicted RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 PVRIGQ6DKI7 326 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 SLC25A24Q6NUK1 477 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 STEAP1BQ6NZ63 245 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 PLET1Q6UQ28 207 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 H2BFWTQ7Z2G1 175 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 CCDC71LQ8N9Z2 235 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 UXS1Q8NBZ7 420 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 OR4C16Q8NGL9 310 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 OR1L6Q8NGR2 347 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 OR4A16Q8NH70 328 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 LHFPL5Q8TAF8 219 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 MARCH1Q8TCQ1 289 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 C15orf40Q8WUR7 153 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 MARC2Q969Z3 335 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 BSCL2Q96G97 398 aaPredicted RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 GRAMD2BQ96HH9 432 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 TMEM56Q96MV1 263 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 RTBDNQ9BSG5 229 aaPredicted RBP3.08□□□□□ -1.92
VTI1B-203ENST00000554636 CHRDL1Q9BU40 450 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 C5orf66Q9H5L9 145 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 SRD5A3Q9H8P0 318 aa3.08□□□□□ -1.92
VTI1B-203ENST00000554636 RETNQ9HD89 108 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms