RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 MED13Q9UHV7 2174 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 A0A1W2PS18 150 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 NUPR1O60356 82 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 PLP1P60201 277 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 TIMM23BQ5SRD1 257 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 WFDC3Q8IUB2 231 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 C1orf162Q8NEQ5 155 aaPredicted RBP8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 PRR7Q8TB68 274 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 PYGO2Q9BRQ0 406 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 PEF1Q9UBV8 284 aaKnown RBP8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 F2Z2F3 143 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 IL4P05112 153 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 CD3EP07766 207 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 KIR2DL2P43627 348 aaPredicted RBP8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 SLC25A33Q9BSK2 321 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 FOXA2Q9Y261 457 aaPredicted RBP8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 MED12LQ86YW9 2145 aa8.41□□□□□ -1.06
SMARCC2-209ENST00000550164 EML5Q05BV3 1969 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 YPEL3P61236 119 aaPredicted RBP8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 Q6ZSR3 168 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 TSKUQ8WUA8 353 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 MCRIP2Q9BUT9 160 aaKnown RBP8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 CLEC7AQ9BXN2 247 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 ADAMTS9Q9P2N4 1935 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 IGKV1D-17A0A075B6S4 117 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 FABP2P12104 132 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 TSPOP30536 169 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 LGALS7P47929 136 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 ASPHD1Q5U4P2 390 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 MBNL2Q5VZF2 373 aaKnown RBP8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 PET117Q6UWS5 81 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 Q6ZPA2 131 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 FAM90A1Q86YD7 464 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 NUP35Q8NFH5 326 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 FBXL15Q9H469 300 aa8.4□□□□□ -1.06
SMARCC2-209ENST00000550164 hDV102S1A0JD36 115 aa8.4□□□□□ -1.07
SMARCC2-209ENST00000550164 DKK1O94907 266 aa8.4□□□□□ -1.07
SMARCC2-209ENST00000550164 NPPCP23582 126 aa8.4□□□□□ -1.07
SMARCC2-209ENST00000550164 Q0VG73 95 aa8.4□□□□□ -1.07
SMARCC2-209ENST00000550164 MPV17L2Q567V2 206 aa8.4□□□□□ -1.07
SMARCC2-209ENST00000550164 TCRBV4S1A1TA0A5B7 111 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 LY96Q9Y6Y9 160 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 PCNX2A6NKB5 2137 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 CGB1A6NKQ9 187 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 TM4SF5O14894 197 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 IGKV1-16P04430 117 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 ERVK11-1P61568 191 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 IGKV3-7A0A075B6H7 116 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 ZNF207O43670 478 aaKnown RBP8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 ZNF138P52744 262 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 SCGB1D4Q6XE38 83 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 OR4A5Q8NH83 315 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 C11orf1Q9H5F2 150 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 ZNRD1Q9P1U0 126 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.39□□□□□ -1.074e-7■■■■□ 23.1
SMARCC2-209ENST00000550164 A1L4Q6 167 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 SCGB1C2P0DMR2 95 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 LINC00312Q9Y6C7 94 aa8.39□□□□□ -1.07
SMARCC2-209ENST00000550164 MALRD1Q5VYJ5 2156 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 OR2T8A6NH00 312 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 CD40P25942 277 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 GPR183P32249 361 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 RPL15P61313 204 aaKnown RBP8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 MYOZ3Q8TDC0 251 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 FMC1Q96HJ9 113 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 RPUSD1Q9UJJ7 312 aaKnown RBP8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 EML6Q6ZMW3 1958 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 IGHV3OR16-8A0A075B7F1 116 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 C7orf71A4D174 169 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 C2orf83Q53S99 150 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 KIR3DL3Q8N743 410 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 PRELID3AQ96N28 172 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 ZNF257Q9Y2Q1 563 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 SMIM17P0DL12 118 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 VDAC2P45880 294 aaPredicted RBP8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 SPANXN1Q5VSR9 72 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 AMMECR1LQ6DCA0 310 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 ODF3L1Q8IXM7 274 aa8.38□□□□□ -1.07
SMARCC2-209ENST00000550164 SH2D7A6NKC9 451 aaPredicted RBP8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 FTH1P19P0C7X4 201 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 LMO1P25800 156 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 RELQ04864 619 aaPredicted RBP8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 ECSCRQ19T08 205 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 NAA38Q9BRA0 125 aaKnown RBP8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 SOX21Q9Y651 276 aaPredicted RBP8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 V9GYV3 84 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 TRAV8-1A0A0A6YYK1 113 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 F5H697 171 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 H3BUT2 72 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 IGLC2P0DOY2 106 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 IGLC3P0DOY3 106 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 CENPVQ7Z7K6 275 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms