RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 OR2T8A6NH00 312 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 CRYM-AS1A6NIL9 109 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 TGOLN2O43493 480 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 POU2AF1Q16633 256 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 CSNK1G2-AS1Q8NCQ2 148 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 ENKURQ8TC29 256 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 MRGPRFQ96AM1 343 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 CXorf58Q96LI9 332 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 NAA60Q9H7X0 242 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 CACFD1Q9UGQ2 172 aa10.91□□□□□ -0.66
CLSTN3-216ENST00000545663 IGHV3OR16-13A0A075B7E8 117 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 IGHV3-74A0A0B4J1X5 117 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 CHEK1O14757 476 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 DEFA4P12838 97 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 HIST1H1BP16401 226 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 PI3P19957 117 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 RPL27AP46776 148 aaKnown RBP10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 MORN3Q6PF18 240 aaPredicted RBP10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 TMED4Q7Z7H5 227 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 IL22RA2Q969J5 263 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 RHPN1-AS1Q9BWJ2 59 aa10.9□□□□□ -0.66
CLSTN3-216ENST00000545663 TCRBP04435 133 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 AKR1C4P17516 323 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 UCP1P25874 307 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 MAS1LP35410 378 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 LPAR6P43657 344 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 CCR6P51684 374 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 TRIM16LQ309B1 348 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 OR2B11Q5JQS5 317 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 FAM90A2PQ658T7 463 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 STHQ8IWL8 128 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 DMBX1Q8NFW5 382 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 FAM210BQ96KR6 192 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 OR2A7Q96R45 310 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 TMEM222Q9H0R3 208 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 FKBP11Q9NYL4 201 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 BET1LQ9NYM9 111 aa10.89□□□□□ -0.67
CLSTN3-216ENST00000545663 CGB1A6NKQ9 187 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 MARCH11A6NNE9 402 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 K7EMT4 169 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 DHFRP00374 187 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 HTN3P15516 51 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 BTCP35070 178 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 SERTAD4-AS1Q5TG53 156 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 FAM219AQ8IW50 185 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 DUSP18Q8NEJ0 188 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 ZNRF2Q8NHG8 242 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 TMEM167AQ8TBQ9 72 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 RRNAD1Q96FB5 475 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 ZNF414Q96IQ9 312 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 TMED3Q9Y3Q3 217 aa10.88□□□□□ -0.67
CLSTN3-216ENST00000545663 IGHV7-4-1A0A0J9YVY3 117 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 DUXBA0A1W2PPF3 345 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 NDUFA4O00483 81 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 SNAPC5O75971 98 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 KBTBD11O94819 623 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 CDS2O95674 445 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 PTTG1O95997 202 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 EMP1P54849 157 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 BRWD1-AS2P59051 145 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 THOC7Q6I9Y2 204 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 TMEM88Q6PEY1 159 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 LGI3Q8N145 548 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 RBPMSQ93062 196 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 TMEM56Q96MV1 263 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 GPHA2Q96T91 129 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 C20orf85Q9H1P6 137 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 TMEM56-RWDD3S4R434 201 aa10.87□□□□□ -0.67
CLSTN3-216ENST00000545663 IGHV3-21A0A0B4J1V1 117 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 KRASP01116 189 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 H2AFB2P0C5Z0 115 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 OR5AC1P0C628 307 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 VAMP1P23763 118 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 AKR1C2P52895 323 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 DLK1P80370 383 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 H2BFWTQ7Z2G1 175 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 PUSL1Q8N0Z8 303 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 RNASE11Q8TAA1 199 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 GLYATL2Q8WU03 294 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 C17orf77Q96MU5 243 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 TP53RKQ96S44 253 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 NUDT15Q9NV35 164 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 PRNDQ9UKY0 176 aa10.86□□□□□ -0.67
CLSTN3-216ENST00000545663 A0A0B4J2A0 478 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 PRAF2O60831 178 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 SFT2D2O95562 160 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 OR4E1P0C645 316 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 FAM3BP58499 235 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 RPL8P62917 257 aaKnown RBP10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 IFITM3Q01628 133 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 C4orf46Q504U0 113 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 HSD17B13Q7Z5P4 300 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 LILRB2Q8N423 598 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 LRTM2Q8N967 370 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 SYT8Q8NBV8 401 aa10.85□□□□□ -0.67
CLSTN3-216ENST00000545663 COQ8AQ8NI60 647 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms