RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 SLC25A2Q9BXI2 301 aa7.92□□□□□ -1.14
SS18-205ENST00000542420 FNDC4Q9H6D8 234 aaPredicted RBP7.92□□□□□ -1.14
SS18-205ENST00000542420 F11RQ9Y624 299 aaKnown RBP7.92□□□□□ -1.14
SS18-205ENST00000542420 MALRD1Q5VYJ5 2156 aa7.92□□□□□ -1.14
SS18-205ENST00000542420 PCNX1Q96RV3 2341 aa7.92□□□□□ -1.14
SS18-205ENST00000542420 TRBV20OR9-2A0A075B6H5 130 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 HELTA6NFD8 242 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 RPL15P61313 204 aaKnown RBP7.91□□□□□ -1.14
SS18-205ENST00000542420 TPTE2P1Q5T6R2 138 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 NPBQ8NG41 125 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 OCC1Q8TAD7 63 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 TMEM37Q8WXS4 190 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 ZFP30Q9Y2G7 519 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 ODF3BA8MYP8 253 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 E7EUB6 86 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 K7EP13 123 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 OR7C2O60412 319 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 FOXH1O75593 365 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 NDUFA3O95167 84 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 PRTN3P24158 256 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 PTTG1IPP53801 180 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 IQCJQ1A5X6 159 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 FAM122AQ96E09 287 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 DERL1Q9BUN8 251 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 AURKAIP1Q9NWT8 199 aaPredicted RBP7.91□□□□□ -1.14
SS18-205ENST00000542420 DPM3Q9P2X0 92 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 CDC42EP3Q9UKI2 254 aa7.91□□□□□ -1.14
SS18-205ENST00000542420 ISLRO14498 428 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 HTR1DP28221 377 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 GPR6P46095 362 aaPredicted RBP7.9□□□□□ -1.14
SS18-205ENST00000542420 GNG4P50150 75 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 TIGITQ495A1 244 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 FAM231DQ6ZW35 169 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 OR2T6Q8NHC8 308 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 NPIPB3Q92617 1050 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 PAXXQ9BUH6 204 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 ELOVL1Q9BW60 279 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 PRORYQ9H606 182 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.14
SS18-205ENST00000542420 TEX22C9J3V5 150 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 ENSAO43768 121 aaKnown RBP7.9□□□□□ -1.15
SS18-205ENST00000542420 MT-ND6P03923 174 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 UBE2L3P68036 154 aaKnown RBP7.9□□□□□ -1.15
SS18-205ENST00000542420 TNXAQ16473 311 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 CCDC144NLQ6NUI1 221 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 S100A7AQ86SG5 101 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 MOB3BQ86TA1 216 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 SGMS2Q8NHU3 365 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 IGF2BP2-AS1Q96M15 143 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 TNFRSF19Q9NS68 423 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 AKAP13Q12802 2813 aa7.9□□□□□ -1.15
SS18-205ENST00000542420 CCL25O15444 150 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 PLA2G5P39877 138 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 OR5I1Q13606 314 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 MAJINQ3KP22 176 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 RASL11AQ6T310 242 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 NECAP1Q8NC96 275 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 OR5AU1Q8NGC0 362 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 ZNF48Q96MX3 618 aaPredicted RBP7.89□□□□□ -1.15
SS18-205ENST00000542420 SSBP3Q9BWW4 388 aaPredicted RBP7.89□□□□□ -1.15
SS18-205ENST00000542420 RNF24Q9Y225 148 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 RP1L1Q8IWN7 2480 aaPredicted RBP7.89□□□□□ -1.15
SS18-205ENST00000542420 GGTLC3B5MD39 225 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 MYCNOSP40205 109 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 CNN1P51911 297 aaKnown RBP7.89□□□□□ -1.15
SS18-205ENST00000542420 RPEL1Q2QD12 228 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 CENPWQ5EE01 88 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 C10orf55Q5SWW7 151 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 WDR73Q6P4I2 378 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 ZNF355PQ9NSJ1 428 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 TMEM14CQ9P0S9 112 aa7.89□□□□□ -1.15
SS18-205ENST00000542420 LOC105371242A0A075B767 164 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 A0A0U1RQK1 487 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 ZNF320A2RRD8 509 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 K7EN84 100 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 PPBPP02775 128 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 GRNP28799 593 aaKnown RBP7.88□□□□□ -1.15
SS18-205ENST00000542420 LGALS4P56470 323 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 EBI3Q14213 229 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 PATE2Q6UY27 113 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 SRSF12Q8WXF0 261 aaKnown RBP7.88□□□□□ -1.15
SS18-205ENST00000542420 CFHR4Q92496 578 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 C20orf144Q9BQM9 153 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 TPSG1Q9NRR2 321 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 TRAPPC1Q9Y5R8 145 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 V9GYV3 84 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 ZFHX4Q86UP3 3567 aa7.88□□□□□ -1.15
SS18-205ENST00000542420 XKRY2A2RUG3 117 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 C22orf46C9J442 243 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 NBR2O15453 112 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 HYPMO75409 117 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 NDUFB8O95169 186 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 MOSP00540 346 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 HNF1AP20823 631 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 CRYBB3P26998 211 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 TFPI2P48307 235 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 MLANAQ16655 118 aa7.87□□□□□ -1.15
SS18-205ENST00000542420 GBGT1Q8N5D6 347 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms