RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 TECRQ9NZ01 308 aaKnown RBP12.14□□□□□ -0.47
VARS2-211ENST00000541562 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 SLC45A2Q9UMX9 530 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 H0YJW9 148 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 TMEM11P17152 192 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
VARS2-211ENST00000541562 IGFL4Q6B9Z1 124 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 SLC25A48Q6ZT89 311 aaKnown RBP12.14□□□□□ -0.47
VARS2-211ENST00000541562 ZMAT5Q9UDW3 170 aaKnown RBP12.14□□□□□ -0.47
VARS2-211ENST00000541562 PGPA6NDG6 321 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 E7EQL1 145 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 ZNF138P52744 262 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
VARS2-211ENST00000541562 IGLV3-9A0A075B6K5 115 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 RPL15P61313 204 aaKnown RBP12.13□□□□□ -0.47
VARS2-211ENST00000541562 PRCDQ00LT1 54 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 Q6ZWC4 215 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 GBGT1Q8N5D6 347 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 ST6GALNAC6Q969X2 333 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 C10orf113Q5VZT2 155 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 Q6ZVH6 145 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 TMEM68Q96MH6 324 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 TP53TG3Q9ULZ0 132 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.13□□□□□ -0.47
VARS2-211ENST00000541562 A0A1W2PPI3 338 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 CRYABP02511 175 aaKnown RBP12.13□□□□□ -0.47
VARS2-211ENST00000541562 CASP6P55212 293 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 OR1L8Q8NGR8 309 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 PAXXQ9BUH6 204 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 TUBG2Q9NRH3 451 aa12.13□□□□□ -0.47
VARS2-211ENST00000541562 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
VARS2-211ENST00000541562 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
VARS2-211ENST00000541562 ZNF600Q6ZNG1 722 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 NAGKQ9UJ70 344 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
VARS2-211ENST00000541562 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 GAL3ST2Q9H3Q3 398 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 DNAJC4Q9NNZ3 241 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
VARS2-211ENST00000541562 NDUFS7O75251 213 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 CD69Q07108 199 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 TMEM144Q7Z5S9 345 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 OR52E5Q8NH55 327 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 RNASE6Q93091 150 aaKnown RBP12.12□□□□□ -0.47
VARS2-211ENST00000541562 INSIG2Q9Y5U4 225 aa12.12□□□□□ -0.47
VARS2-211ENST00000541562 TMEM178BH3BS89 294 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 PATE2Q6UY27 113 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 BCL6BQ8N143 479 aaPredicted RBP12.11□□□□□ -0.47
VARS2-211ENST00000541562 Q8NA96 180 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 MPDU1O75352 247 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 C8orf88P0DMB2 117 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 USF1P22415 310 aaPredicted RBP12.11□□□□□ -0.47
VARS2-211ENST00000541562 RPL19P84098 196 aaKnown RBP12.11□□□□□ -0.47
VARS2-211ENST00000541562 PRR20EP86478 221 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 PRR20CP86479 221 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 PRR20DP86480 221 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 PRR20BP86481 221 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 PRR20AP86496 221 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 C17orf77Q96MU5 243 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 PYGO2Q9BRQ0 406 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 IL36BQ9NZH7 164 aa12.11□□□□□ -0.47
VARS2-211ENST00000541562 CCL21O00585 134 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 VENTXO95231 258 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 RNASEKQ6P5S7 137 aaKnown RBP12.1□□□□□ -0.47
VARS2-211ENST00000541562 ASCL5Q7RTU5 278 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 SFXN3Q9BWM7 321 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 TNFRSF19Q9NS68 423 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 USP9XQ93008 2570 aaPredicted RBP12.1□□□□□ -0.47
VARS2-211ENST00000541562 FXYD7P58549 80 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 CGB1A6NKQ9 187 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 SIGLECL1Q8N7X8 197 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 PARD6GQ9BYG4 376 aaPredicted RBP12.1□□□□□ -0.47
VARS2-211ENST00000541562 V9GYV3 84 aa12.1□□□□□ -0.47
VARS2-211ENST00000541562 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 A8MWP6 167 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 LOXP28300 417 aaPredicted RBP12.09□□□□□ -0.47
VARS2-211ENST00000541562 LINC00310P59036 64 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 UBE2G1P62253 170 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 SLAQ13239 276 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 REC114Q7Z4M0 266 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 PGLYRP4Q96LB8 373 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 SLC25A2Q9BXI2 301 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 LINC00312Q9Y6C7 94 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 IGHV3OR16-10A0A075B7F0 116 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 IGHV3-49A0A0A0MS15 119 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 IGHV1-69-2A0A0G2JMI3 117 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 FBLN7Q53RD9 439 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 SPACA3Q8IXA5 215 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 TCTEX1D1Q8N7M0 179 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 TBL2Q9Y4P3 447 aaKnown RBP12.09□□□□□ -0.47
VARS2-211ENST00000541562 C22orf46C9J442 243 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 OR4C13Q8NGP0 309 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 FAM222BQ8WU58 562 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 ABCA12Q86UK0 2595 aa12.09□□□□□ -0.47
VARS2-211ENST00000541562 SONP18583 2426 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms