RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 RBMY1FQ15415 496 aaKnown RBP10.26□□□□□ -0.77
SNHG1-213ENST00000540725 ACTL10Q5JWF8 245 aa10.26□□□□□ -0.77
SNHG1-213ENST00000540725 OR52E5Q8NH55 327 aa10.26□□□□□ -0.77
SNHG1-213ENST00000540725 LHFPL5Q8TAF8 219 aa10.26□□□□□ -0.77
SNHG1-213ENST00000540725 GLYATL2Q8WU03 294 aa10.26□□□□□ -0.77
SNHG1-213ENST00000540725 RBPMSQ93062 196 aaKnown RBP10.26□□□□□ -0.77
SNHG1-213ENST00000540725 HEYLQ9NQ87 328 aaPredicted RBP10.26□□□□□ -0.77
SNHG1-213ENST00000540725 C14orf166Q9Y224 244 aaKnown RBP10.26□□□□□ -0.77
SNHG1-213ENST00000540725 U3KQE9 123 aa10.26□□□□□ -0.77
SNHG1-213ENST00000540725 TEX13DA0A0J9YY54 714 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-213ENST00000540725 ZNF705EA8MWA4 302 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-213ENST00000540725 GABARAPH6UMI1 98 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 IGLC1P0CG04 106 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 EIF2B2P49770 351 aaKnown RBP10.25□□□□□ -0.77
SNHG1-213ENST00000540725 DHRS2Q13268 280 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 C2orf83Q53S99 150 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 FAAP20Q6NZ36 180 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 PRSS54Q6PEW0 395 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 OR1S2Q8NGQ3 325 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 RTBDNQ9BSG5 229 aaPredicted RBP10.25□□□□□ -0.77
SNHG1-213ENST00000540725 NAA60Q9H7X0 242 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 CACNG5Q9UF02 275 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 X6R8D5 127 aa10.25□□□□□ -0.77
SNHG1-213ENST00000540725 HELTA6NFD8 242 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 HNRNPCP07910 306 aaKnown RBP eCLIP10.24□□□□□ -0.77
SNHG1-213ENST00000540725 SLC25A4P12235 298 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 HLA-DMBP28068 263 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 OR10J1P30954 320 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 YPEL3P61236 119 aaPredicted RBP10.24□□□□□ -0.77
SNHG1-213ENST00000540725 SSBP1Q04837 148 aaKnown RBP10.24□□□□□ -0.77
SNHG1-213ENST00000540725 MEF2DQ14814 521 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 GPR107Q5VW38 600 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 C16orf54Q6UWD8 224 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 SELENOHQ8IZQ5 122 aaKnown RBP10.24□□□□□ -0.77
SNHG1-213ENST00000540725 SLC24A4Q8NFF2 622 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 RNASEH2CQ8TDP1 164 aaKnown RBP10.24□□□□□ -0.77
SNHG1-213ENST00000540725 Q8WTZ3 238 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 GPR146Q96CH1 333 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 CLEC5AQ9NY25 188 aa10.24□□□□□ -0.77
SNHG1-213ENST00000540725 CEBPZOSA8MTT3 80 aa10.23□□□□□ -0.77
SNHG1-213ENST00000540725 MRPS10P82664 201 aaKnown RBP10.23□□□□□ -0.77
SNHG1-213ENST00000540725 DHODHQ02127 395 aa10.23□□□□□ -0.77
SNHG1-213ENST00000540725 SURF2Q15527 256 aaPredicted RBP10.23□□□□□ -0.77
SNHG1-213ENST00000540725 PSMG4Q5JS54 123 aa10.23□□□□□ -0.77
SNHG1-213ENST00000540725 TMEM268Q5VZI3 342 aa10.23□□□□□ -0.77
SNHG1-213ENST00000540725 Q6ZTC4 211 aa10.23□□□□□ -0.77
SNHG1-213ENST00000540725 TMEM170AQ8WVE7 144 aa10.23□□□□□ -0.77
SNHG1-213ENST00000540725 ELOA3CA0A087WX78 387 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-213ENST00000540725 TRAV10A0A0B4J240 114 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 CRYM-AS1A6NIL9 109 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 DISC1C4P0D8 188 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 RGS5O15539 181 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 IL4P05112 153 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 AP2S1P53680 142 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-213ENST00000540725 USF2Q15853 346 aaPredicted RBP10.22□□□□□ -0.77
SNHG1-213ENST00000540725 CNPY1Q3B7I2 92 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 CSNK1G2-AS1Q8NCQ2 148 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 RAB40CQ96S21 281 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 TBC1D24Q9ULP9 559 aa10.22□□□□□ -0.77
SNHG1-213ENST00000540725 FAM90A26D6RGX4 464 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 CTDSP2O14595 271 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 NPY1RP25929 384 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 ALDH3B2P48448 385 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 ETFRF1Q6IPR1 90 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 CENPSQ8N2Z9 138 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 OR4C16Q8NGL9 310 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 SMIM4Q8WVI0 70 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 NPIPB3Q92617 1050 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 KRTAP17-1Q9BYP8 105 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 RBM38Q9H0Z9 239 aaKnown RBP10.21□□□□□ -0.78
SNHG1-213ENST00000540725 GPR132Q9UNW8 380 aa10.21□□□□□ -0.78
SNHG1-213ENST00000540725 IGHV4-4A0A075B6R2 117 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 ZNF701M0R085 212 aaPredicted RBP10.2□□□□□ -0.78
SNHG1-213ENST00000540725 NXPH3O95157 252 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 AKAIN1P0CW23 69 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
SNHG1-213ENST00000540725 NOXA1Q86UR1 476 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 ACY3Q96HD9 319 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 NRN1Q9NPD7 142 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 CELA1Q9UNI1 258 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 TMEM56-RWDD3S4R434 201 aa10.2□□□□□ -0.78
SNHG1-213ENST00000540725 BUB3O43684 328 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 GSTZ1O43708 216 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-213ENST00000540725 TOMM40O96008 361 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 RD3LP0DJH9 198 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 SULT1A3P0DMM9 295 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 SULT1A4P0DMN0 295 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 SIGLEC15Q6ZMC9 328 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 OR51S1Q8NGJ8 323 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 PRRT1Q99946 306 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 C1QTNF4Q9BXJ3 329 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 SEPSECSQ9HD40 501 aaKnown RBP10.19□□□□□ -0.78
SNHG1-213ENST00000540725 PTTG2Q9NZH5 202 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
SNHG1-213ENST00000540725 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms