RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 DNAJC4Q9NNZ3 241 aa11.41□□□□□ -0.58
INO80E-203ENST00000540562 FAM87AP0C7U9 286 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 CD99P14209 185 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 GFRALQ6UXV0 394 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 VAMP8Q9BV40 100 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 TUBG2Q9NRH3 451 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 IGHV3OR16-8A0A075B7F1 116 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 MKRN2OSH3BPM6 223 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
INO80E-203ENST00000540562 PATE2Q6UY27 113 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 OR1L8Q8NGR8 309 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 NOL4LQ96MY1 436 aaPredicted RBP11.4□□□□□ -0.58
INO80E-203ENST00000540562 TPPP3Q9BW30 176 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 TMEM167BQ9NRX6 74 aa11.4□□□□□ -0.58
INO80E-203ENST00000540562 A0A1W2PPI3 338 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 NDUFB3O43676 98 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 ERASQ7Z444 233 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 ZNF835Q9Y2P0 537 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 CGB1A6NKQ9 187 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 CFHR2P36980 270 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 TCTAP57738 103 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 TAS2R45P59539 299 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 PLGLAQ15195 96 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 AARDQ4LEZ3 155 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 RNASEKQ6P5S7 137 aaKnown RBP11.39□□□□□ -0.59
INO80E-203ENST00000540562 LINC01560Q8TB33 94 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 ST6GALNAC6Q969X2 333 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 ADTRPQ96IZ2 230 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 GAL3ST2Q9H3Q3 398 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 CDC42EP3Q9UKI2 254 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 PGPA6NDG6 321 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 PRRG2O14669 202 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 SSUH2Q9Y2M2 353 aa11.39□□□□□ -0.59
INO80E-203ENST00000540562 MUC21A0A0G2JKD1 596 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 MUC21A0A140T8X8 626 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 BMPR1BO00238 502 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 IGLV2-8P01709 118 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 GRNP28799 593 aaKnown RBP11.38□□□□□ -0.59
INO80E-203ENST00000540562 YPEL3P61236 119 aaPredicted RBP11.38□□□□□ -0.59
INO80E-203ENST00000540562 CR1LQ2VPA4 569 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 MUC21Q5SSG8 566 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 TPTE2P1Q5T6R2 138 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 NRN1Q9NPD7 142 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 THBDP07204 575 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 LYZP61626 148 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 KLF17Q5JT82 389 aaPredicted RBP11.38□□□□□ -0.59
INO80E-203ENST00000540562 Q6ZS92 163 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 CORO2AQ92828 525 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 FAM167A-AS1Q96KT0 104 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 ZNF331Q9NQX6 463 aaPredicted RBP11.38□□□□□ -0.59
INO80E-203ENST00000540562 NDUFA4L2Q9NRX3 87 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 LINC00312Q9Y6C7 94 aa11.38□□□□□ -0.59
INO80E-203ENST00000540562 M0R143 59 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 DLL1O00548 723 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 ZNF138P52744 262 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 Q56UQ5 140 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 TMEM136Q6ZRR5 245 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 PRSS33Q8NF86 280 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 FBXL15Q9H469 300 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 HRNRQ86YZ3 2850 aaPredicted RBP11.37□□□□□ -0.59
INO80E-203ENST00000540562 IGHV3-35A0A0C4DH35 117 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 FAM90A27PA6NNH2 459 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 UBE2G1P62253 170 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 LRRC10Q5BKY1 277 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 C1orf194Q5T5A4 169 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 TNFRSF19Q9NS68 423 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 VPS13CQ709C8 3753 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 HIGD1CA8MV81 97 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 C22orf46C9J442 243 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 APCSP02743 223 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 ZNF841Q6ZN19 808 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 OR4C13Q8NGP0 309 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 OR5B3Q8NH48 314 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 FAM222BQ8WU58 562 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 CLEC5AQ9NY25 188 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 HILPDAQ9Y5L2 63 aa11.37□□□□□ -0.59
INO80E-203ENST00000540562 A0A1W2PS18 150 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 RBP4P02753 201 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 CSN3P07498 182 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 NUTF2P61970 127 aaKnown RBP11.36□□□□□ -0.59
INO80E-203ENST00000540562 C2orf83Q53S99 150 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 GDF5OSQ5U4N7 250 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 LINC00322Q6ZN03 302 aaPredicted RBP11.36□□□□□ -0.59
INO80E-203ENST00000540562 EXOC3-AS1Q8N2X6 119 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 FAM57AQ8TBR7 257 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 BRS3P32247 399 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 GATA4P43694 442 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 CX3CL1P78423 397 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 MMDQ15546 238 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 NUDT10Q8NFP7 164 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 NUDT11Q96G61 164 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 PGLYRP4Q96LB8 373 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 ZNF586Q9NXT0 402 aa11.36□□□□□ -0.59
INO80E-203ENST00000540562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.35□□□□□ -0.596e-7■■■■□ 24.4
INO80E-203ENST00000540562 C9JCJ5 164 aa11.35□□□□□ -0.59
INO80E-203ENST00000540562 TMEM178BH3BS89 294 aa11.35□□□□□ -0.59
INO80E-203ENST00000540562 C11orf52Q96A22 123 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms