RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TMEM268Q5VZI3 342 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 LILRB2Q8N423 598 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 NAA50Q9GZZ1 169 aaKnown RBP11.2□□□□□ -0.62
UBE3B-211ENST00000539843 FNDC4Q9H6D8 234 aaPredicted RBP11.2□□□□□ -0.62
UBE3B-211ENST00000539843 SCP2D1Q9UJQ7 156 aa11.2□□□□□ -0.62
UBE3B-211ENST00000539843 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
UBE3B-211ENST00000539843 K7EQG2 157 aa11.19□□□□□ -0.62
UBE3B-211ENST00000539843 MIFP14174 115 aa11.19□□□□□ -0.62
UBE3B-211ENST00000539843 RND2P52198 227 aa11.19□□□□□ -0.62
UBE3B-211ENST00000539843 BSXQ3C1V8 233 aa11.19□□□□□ -0.62
UBE3B-211ENST00000539843 SMIM4Q8WVI0 70 aa11.19□□□□□ -0.62
UBE3B-211ENST00000539843 MRPS26Q9BYN8 205 aaKnown RBP11.19□□□□□ -0.62
UBE3B-211ENST00000539843 HRH4Q9H3N8 390 aa11.19□□□□□ -0.62
UBE3B-211ENST00000539843 PLECQ15149 4684 aaKnown RBP11.18□□□□□ -0.62
UBE3B-211ENST00000539843 NOL3O60936 208 aaKnown RBP11.18□□□□□ -0.62
UBE3B-211ENST00000539843 SULT1A3P0DMM9 295 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 SULT1A4P0DMN0 295 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 ANXA3P12429 323 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 NPY1RP25929 384 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 YPEL3P61236 119 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-211ENST00000539843 AARDQ4LEZ3 155 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 TRPT1Q86TN4 253 aaKnown RBP11.18□□□□□ -0.62
UBE3B-211ENST00000539843 CLVS1Q8IUQ0 354 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-211ENST00000539843 SELENOHQ8IZQ5 122 aaKnown RBP11.18□□□□□ -0.62
UBE3B-211ENST00000539843 FAM24BQ8N5W8 94 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 GLYATL2Q8WU03 294 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 IL22RA2Q969J5 263 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 DIRAS2Q96HU8 199 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
UBE3B-211ENST00000539843 CRYM-AS1A6NIL9 109 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 DEFB4AO15263 64 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 IFNA10P01566 189 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 IGKV1-17P01599 117 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 IL4P05112 153 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 IGLC1P0CG04 106 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 SRPXP78539 464 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 PSMG4Q5JS54 123 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 FAAP20Q6NZ36 180 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 PRSS54Q6PEW0 395 aa11.17□□□□□ -0.62
UBE3B-211ENST00000539843 RTBDNQ9BSG5 229 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-211ENST00000539843 MRPL36Q9P0J6 103 aaKnown RBP11.17□□□□□ -0.62
UBE3B-211ENST00000539843 IGLL5B9A064 214 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 CTDSPLO15194 276 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 FABP1P07148 127 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 RD3LP0DJH9 198 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 MLANAQ16655 118 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 Q6ZRM9 215 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 RPP25LQ8N5L8 163 aaKnown RBP11.16□□□□□ -0.62
UBE3B-211ENST00000539843 OR4C16Q8NGL9 310 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 DCANP1Q8TF63 244 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 GPR146Q96CH1 333 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 ACY3Q96HD9 319 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 MCUBQ9NWR8 336 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 RSL24D1Q9UHA3 163 aaKnown RBP11.16□□□□□ -0.62
UBE3B-211ENST00000539843 TBC1D24Q9ULP9 559 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 GPR132Q9UNW8 380 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 TMEM56-RWDD3S4R434 201 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 U3KQ87 197 aa11.16□□□□□ -0.62
UBE3B-211ENST00000539843 HYDINQ4G0P3 5121 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 IGHV4-28A0A0C4DH34 117 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 KNCNA6PVL3 124 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 DEDDO75618 318 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 TOMM40O96008 361 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 SMIM18P0DKX4 95 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 CCR6P51684 374 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 ATP5IP56385 69 aaPredicted RBP11.15□□□□□ -0.62
UBE3B-211ENST00000539843 C16orf54Q6UWD8 224 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 SIGLEC15Q6ZMC9 328 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 OR51S1Q8NGJ8 323 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 LHFPL5Q8TAF8 219 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 RAB2BQ8WUD1 216 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 MIXL1Q9H2W2 232 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 SEPSECSQ9HD40 501 aaKnown RBP11.15□□□□□ -0.62
UBE3B-211ENST00000539843 NRN1Q9NPD7 142 aa11.15□□□□□ -0.62
UBE3B-211ENST00000539843 TRAV10A0A0B4J240 114 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 CTDSP2O14595 271 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 NXPH3O95157 252 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 FAUP35544 74 aaKnown RBP11.14□□□□□ -0.63
UBE3B-211ENST00000539843 LGI3Q8N145 548 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 Q8NAQ8 132 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 DTD1Q8TEA8 209 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 NPIPB3Q92617 1050 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 SLC35E1Q96K37 410 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 BCL7BQ9BQE9 202 aa11.14□□□□□ -0.63
UBE3B-211ENST00000539843 CCDC59Q9P031 241 aaKnown RBP11.14□□□□□ -0.63
UBE3B-211ENST00000539843 A0A0B4J2A0 478 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 ZNF705EA8MWA4 302 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-211ENST00000539843 SMCO1Q147U7 214 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 OR51G1Q8NGK1 321 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 RAB40CQ96S21 281 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 PBDC1Q9BVG4 233 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 SHPKQ9UHJ6 478 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 U3KQE9 123 aa11.13□□□□□ -0.63
UBE3B-211ENST00000539843 ZFP92A6NM28 416 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 AKR1C4P17516 323 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 C4BPBP20851 252 aa11.12□□□□□ -0.63
UBE3B-211ENST00000539843 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms