RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 GNG7O60262 68 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 ADAP1O75689 374 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 IFNA10P01566 189 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 IFITM3Q01628 133 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 RELQ04864 619 aaPredicted RBP11.17□□□□□ -0.62
USB1-203ENST00000539737 DEFB114Q30KQ6 69 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 OR52B4Q8NGK2 314 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 ZNF431Q8TF32 576 aaPredicted RBP11.17□□□□□ -0.62
USB1-203ENST00000539737 TMEM190Q8WZ59 177 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 MARC2Q969Z3 335 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 CIB3Q96Q77 187 aaPredicted RBP11.17□□□□□ -0.62
USB1-203ENST00000539737 ZNF436Q9C0F3 470 aaPredicted RBP11.17□□□□□ -0.62
USB1-203ENST00000539737 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
USB1-203ENST00000539737 NDUFA4O00483 81 aa11.16□□□□□ -0.62
USB1-203ENST00000539737 CBLN1P23435 193 aa11.16□□□□□ -0.62
USB1-203ENST00000539737 ETFRF1Q6IPR1 90 aa11.16□□□□□ -0.62
USB1-203ENST00000539737 SYNGR2O43760 224 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 SLC25A4P12235 298 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 ADMP35318 185 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 ELLP55199 621 aaPredicted RBP11.15□□□□□ -0.62
USB1-203ENST00000539737 RPP30P78346 268 aaKnown RBP11.15□□□□□ -0.62
USB1-203ENST00000539737 RBPMS2Q6ZRY4 209 aaKnown RBP11.15□□□□□ -0.62
USB1-203ENST00000539737 UXS1Q8NBZ7 420 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 SEC22CQ9BRL7 303 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 OVOL2Q9BRP0 275 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 CHRDL1Q9BU40 450 aa11.15□□□□□ -0.62
USB1-203ENST00000539737 IGHV3-35A0A0C4DH35 117 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 A0A0J9YWU9 116 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 TMEM213A2RRL7 107 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 WRBO00258 174 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 IGHV3-48P01763 117 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 IL5P05113 134 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 CTSGP08311 255 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 IAPPP10997 89 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 IAH1Q2TAA2 248 aaPredicted RBP11.14□□□□□ -0.63
USB1-203ENST00000539737 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 NRARPQ7Z6K4 114 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 C12orf45Q8N5I9 185 aaPredicted RBP11.14□□□□□ -0.63
USB1-203ENST00000539737 OR4D5Q8NGN0 318 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 OR4X1Q8NH49 305 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 TMEM170AQ8WVE7 144 aa11.14□□□□□ -0.63
USB1-203ENST00000539737 FNDC4Q9H6D8 234 aaPredicted RBP11.14□□□□□ -0.63
USB1-203ENST00000539737 GPN1Q9HCN4 374 aaPredicted RBP11.14□□□□□ -0.63
USB1-203ENST00000539737 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
USB1-203ENST00000539737 MPTX1A8MV57 137 aa11.13□□□□□ -0.63
USB1-203ENST00000539737 PRAF2O60831 178 aa11.13□□□□□ -0.63
USB1-203ENST00000539737 CLN5O75503 358 aa11.13□□□□□ -0.63
USB1-203ENST00000539737 IFNA4P05014 189 aa11.13□□□□□ -0.63
USB1-203ENST00000539737 NKX2-1P43699 371 aaPredicted RBP11.13□□□□□ -0.63
USB1-203ENST00000539737 RAB11AP62491 216 aa11.13□□□□□ -0.63
USB1-203ENST00000539737 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
USB1-203ENST00000539737 MRPL27Q9P0M9 148 aaKnown RBP11.13□□□□□ -0.63
USB1-203ENST00000539737 TRAV30A0A087WSZ9 112 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 TRAV25A0A0B4J276 109 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 C15orf62A8K5M9 175 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
USB1-203ENST00000539737 ID3Q02535 119 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 LAMTOR1Q6IAA8 161 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 BTNL8Q6UX41 500 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 ZNF600Q6ZNG1 722 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 ZBTB8BQ8NAP8 495 aaPredicted RBP11.12□□□□□ -0.63
USB1-203ENST00000539737 C20orf24Q9BUV8 137 aa11.12□□□□□ -0.63
USB1-203ENST00000539737 DNAH6Q9C0G6 4158 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 INMT-MINDY4F8WBC2 141 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 YIF1AO95070 293 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 TMEM50AO95807 157 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 RND2P52198 227 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 TM4SF20Q53R12 229 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 PRSS54Q6PEW0 395 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 TMEM61Q8N0U2 210 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 OR1S2Q8NGQ3 325 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 OR10C1Q96KK4 312 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 GINS3Q9BRX5 216 aa11.11□□□□□ -0.63
USB1-203ENST00000539737 PAIP2BQ9ULR5 123 aaKnown RBP11.11□□□□□ -0.63
USB1-203ENST00000539737 C5orf51A6NDU8 294 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 SNRPGP15A8MWD9 76 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 FAM25EA8MYX2 175 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 K7EMT4 169 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 CCSO14618 274 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 SSSCA1O60232 199 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 C8orf88P0DMB2 117 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 GPX4P36969 197 aaPredicted RBP11.1□□□□□ -0.63
USB1-203ENST00000539737 POLR2GP62487 172 aaKnown RBP eCLIP11.1□□□□□ -0.63
USB1-203ENST00000539737 SLC35E1Q96K37 410 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 MARVELD1Q9BSK0 173 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 MRPL36Q9P0J6 103 aaKnown RBP11.1□□□□□ -0.63
USB1-203ENST00000539737 GSKIPQ9P0R6 139 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 MLXQ9UH92 298 aa11.1□□□□□ -0.63
USB1-203ENST00000539737 STRAPQ9Y3F4 350 aaKnown RBP11.1□□□□□ -0.63
USB1-203ENST00000539737 PTTG1O95997 202 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 OR10J1P30954 320 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 BMI1P35226 326 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 MLANAQ16655 118 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 SPANXN5Q5MJ07 72 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 ACY3Q96HD9 319 aa11.09□□□□□ -0.63
USB1-203ENST00000539737 RAB40CQ96S21 281 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms