RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 PSMG3-AS1Q96PY0 264 aa16.14■□□□□ 0.17
PACSIN3-211ENST00000539589 TBX15Q96SF7 602 aa16.14■□□□□ 0.17
PACSIN3-211ENST00000539589 CSMD1Q96PZ7 3565 aa16.14■□□□□ 0.17
PACSIN3-211ENST00000539589 ZFHX3Q15911 3703 aa16.14■□□□□ 0.17
PACSIN3-211ENST00000539589 IGKV1D-37A0A075B6S9 117 aa16.14■□□□□ 0.17
PACSIN3-211ENST00000539589 PSMB11A5LHX3 300 aa16.14■□□□□ 0.17
PACSIN3-211ENST00000539589 SRSF12Q8WXF0 261 aaKnown RBP16.14■□□□□ 0.17
PACSIN3-211ENST00000539589 TEX22C9J3V5 150 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 COX7A2P2O60397 106 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 APELAP0DMC3 54 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 GALR1P47211 349 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 MFAP2P55001 183 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 ZNF90Q03938 601 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 MMDQ15546 238 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 OR5T1Q8NG75 326 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 C11orf52Q96A22 123 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 ZNF503Q96F45 646 aa16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 MRPL36Q9P0J6 103 aaKnown RBP16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 F11RQ9Y624 299 aaKnown RBP16.13■□□□□ 0.17
PACSIN3-211ENST00000539589 UBE2CO00762 179 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 PFN1P07737 140 aaKnown RBP16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 CD99P14209 185 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 BPIFB3P59826 476 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 CFHR4Q92496 578 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 SRSF8Q9BRL6 282 aaKnown RBP16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 AP4M1O00189 453 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 FCN1O00602 326 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 TOX4O94842 621 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 C10orf113Q5VZT2 155 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 LINC00518Q8N0U6 118 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 OR4X1Q8NH49 305 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 NAV2Q8IVL1 2488 aa16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 GCN1Q92616 2671 aaKnown RBP16.12■□□□□ 0.17
PACSIN3-211ENST00000539589 NBR2O15453 112 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 MOSP00540 346 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 CLEC12BQ2HXU8 276 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 NECAP1Q8NC96 275 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 TMEM116Q8NCL8 245 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 TNFRSF19Q9NS68 423 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 CNIH1O95406 144 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 FABP9Q0Z7S8 132 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 CCDC144NLQ6NUI1 221 aa16.11■□□□□ 0.17
PACSIN3-211ENST00000539589 PPP1R2P9O14990 202 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 TRGC2P03986 189 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 DYNAPQ8N1N2 210 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 NPBQ8NG41 125 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 FAM167A-AS1Q96KT0 104 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 TRGV9Q99603 122 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 PYGO2Q9BRQ0 406 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 SLC25A2Q9BXI2 301 aa16.1■□□□□ 0.17
PACSIN3-211ENST00000539589 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.09■□□□□ 0.175e-7■□□□□ 9.1
PACSIN3-211ENST00000539589 TRBV20OR9-2A0A075B6H5 130 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 OR10J4P0C629 311 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 SRP14P37108 136 aaKnown RBP16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 DSCR9P59020 149 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 C19orf35Q6ZS72 473 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 AURKAIP1Q9NWT8 199 aaPredicted RBP16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 ELOA3CA0A087WX78 387 aaPredicted RBP16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 A0A1W2PRE2 83 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 OOSP1A8MZH6 123 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 PAX8Q06710 450 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 SSX2Q16385 188 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 MINOS1Q5TGZ0 78 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 OR5AU1Q8NGC0 362 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 EAF1Q96JC9 268 aaPredicted RBP16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 ZNF355PQ9NSJ1 428 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 MINOS1-NBL1R4GNA1 71 aa16.09■□□□□ 0.17
PACSIN3-211ENST00000539589 NAV3Q8IVL0 2385 aa16.08■□□□□ 0.17
PACSIN3-211ENST00000539589 A0A096LNT2 108 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 TRAV5A0A0B4J249 113 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 NDUFA3O95167 84 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 LGALS4P56470 323 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 HES1Q14469 280 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 MORN5Q5VZ52 161 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 KCNIP4Q6PIL6 250 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 PATE2Q6UY27 113 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 OR2T10Q8NGZ9 312 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 AJUBAQ96IF1 538 aa16.08■□□□□ 0.16
PACSIN3-211ENST00000539589 MDFIC2A0A1B0GVS7 189 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 PGPEP1LA6NFU8 196 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 C9JCJ5 164 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 UBE2L3P68036 154 aaKnown RBP16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 FBLN7Q53RD9 439 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 OCC1Q8TAD7 63 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 SFRP2Q96HF1 295 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 ELOVL1Q9BW60 279 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 LY96Q9Y6Y9 160 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 RUSC1-AS1Q66K80 236 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 SRD5A3Q9H8P0 318 aa16.07■□□□□ 0.16
PACSIN3-211ENST00000539589 ZANQ9Y493 2812 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 IGHV3-21A0A0B4J1V1 117 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 CD24P25063 80 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 UBE2E1P51965 193 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 PAXXQ9BUH6 204 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 WNT10AQ9GZT5 417 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 DMRT1Q9Y5R6 373 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 HELTA6NFD8 242 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 PPP5D1E7EU14 171 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 HIST1H2BKO60814 126 aa16.06■□□□□ 0.16
PACSIN3-211ENST00000539589 HIST1H2BJP06899 126 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms