RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 FOXA3P55318 350 aaPredicted RBP16.42■□□□□ 0.22
TMEM260-203ENST00000539559 DIAPH2-AS1Q14236 149 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 RUSC1-AS1Q66K80 236 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 TCF24Q7RTU0 167 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 ZNF329Q86UD4 541 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.42■□□□□ 0.22
TMEM260-203ENST00000539559 OR2D3Q8NGH3 330 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 HARBI1Q96MB7 349 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 PAXXQ9BUH6 204 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 TNFRSF19Q9NS68 423 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 DYSFO75923 2080 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 MGAQ8IWI9 3026 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 PEX7O00628 323 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 CRYABP02511 175 aaKnown RBP16.42■□□□□ 0.22
TMEM260-203ENST00000539559 CFHR2P36980 270 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 TBR1Q16650 682 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 MBD6Q96DN6 1003 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 ADTRPQ96IZ2 230 aa16.42■□□□□ 0.22
TMEM260-203ENST00000539559 IGLL1P15814 213 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 PCP4P48539 62 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 COX19Q49B96 90 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 C19orf35Q6ZS72 473 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 SEM1Q6ZVN7 128 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 ASCL5Q7RTU5 278 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 COMMD5Q9GZQ3 224 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 KLK10O43240 276 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 PTTG1IPP53801 180 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 IGFL3Q6UXB1 125 aa16.41■□□□□ 0.22
TMEM260-203ENST00000539559 C20orf202A1L168 122 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 APELAP0DMC3 54 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 CCL3L1P16619 93 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 ZCCHC24Q8N2G6 241 aaKnown RBP16.4■□□□□ 0.22
TMEM260-203ENST00000539559 ALKBH7Q9BT30 221 aaPredicted RBP16.4■□□□□ 0.22
TMEM260-203ENST00000539559 CBY1Q9Y3M2 126 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 ITGB1BP1O14713 200 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 C10orf113Q5VZT2 155 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 SLC25A48Q6ZT89 311 aaKnown RBP16.4■□□□□ 0.22
TMEM260-203ENST00000539559 C22orf34Q6ZV56 151 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 LINC00173Q6ZV60 143 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 PNKDQ8N490 385 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 OR1L8Q8NGR8 309 aa16.4■□□□□ 0.22
TMEM260-203ENST00000539559 RNASE8Q8TDE3 154 aaKnown RBP16.4■□□□□ 0.22
TMEM260-203ENST00000539559 WT1-ASQ06250 92 aa16.39■□□□□ 0.21
TMEM260-203ENST00000539559 LINC00322Q6ZN03 302 aaPredicted RBP16.39■□□□□ 0.21
TMEM260-203ENST00000539559 KLHDC1Q8N7A1 406 aa16.39■□□□□ 0.21
TMEM260-203ENST00000539559 RNF7Q9UBF6 113 aa16.39■□□□□ 0.21
TMEM260-203ENST00000539559 IGHV3-21A0A0B4J1V1 117 aa16.39■□□□□ 0.21
TMEM260-203ENST00000539559 MOSP00540 346 aa16.39■□□□□ 0.21
TMEM260-203ENST00000539559 TNFAIP6P98066 277 aaPredicted RBP16.39■□□□□ 0.21
TMEM260-203ENST00000539559 URB1-AS1Q96HZ7 61 aa16.39■□□□□ 0.21
TMEM260-203ENST00000539559 OR8B2Q96RD0 313 aa16.39■□□□□ 0.21
TMEM260-203ENST00000539559 MCRIP2Q9BUT9 160 aaKnown RBP16.39■□□□□ 0.21
TMEM260-203ENST00000539559 COL25A1Q9BXS0 654 aaPredicted RBP16.39■□□□□ 0.21
TMEM260-203ENST00000539559 RPUSD1Q9UJJ7 312 aaKnown RBP16.39■□□□□ 0.21
TMEM260-203ENST00000539559 GRAMD2BQ96HH9 432 aa16.38■□□□□ 0.21
TMEM260-203ENST00000539559 MRPL27Q9P0M9 148 aaKnown RBP16.38■□□□□ 0.21
TMEM260-203ENST00000539559 ADGRG4Q8IZF6 3080 aa16.38■□□□□ 0.21
TMEM260-203ENST00000539559 DLL1O00548 723 aa16.38■□□□□ 0.21
TMEM260-203ENST00000539559 ORM2P19652 201 aa16.38■□□□□ 0.21
TMEM260-203ENST00000539559 ZNF474Q6S9Z5 364 aaPredicted RBP16.38■□□□□ 0.21
TMEM260-203ENST00000539559 OR5B3Q8NH48 314 aa16.38■□□□□ 0.21
TMEM260-203ENST00000539559 NDUFA4L2Q9NRX3 87 aa16.38■□□□□ 0.21
TMEM260-203ENST00000539559 C2orf70A6NJV1 201 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 UBE2G1P62253 170 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 FXYD5Q96DB9 178 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 C19orf24Q9BVV8 132 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 MRPL32Q9BYC8 188 aaKnown RBP16.37■□□□□ 0.21
TMEM260-203ENST00000539559 IGKV1D-37A0A075B6S9 117 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 CGB1A6NKQ9 187 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 IGHV1-46P01743 117 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 ERHP84090 104 aaKnown RBP16.37■□□□□ 0.21
TMEM260-203ENST00000539559 BET1LQ9NYM9 111 aa16.37■□□□□ 0.21
TMEM260-203ENST00000539559 TRAV9-2A0A087WT02 112 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 ZNF137PP52743 207 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 CCL8P80075 99 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 LEMD1Q68G75 181 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 Q71RC1 249 aaPredicted RBP16.36■□□□□ 0.21
TMEM260-203ENST00000539559 LINC00305Q7Z4B0 112 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 OR8B3Q8NGG8 313 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 TPSG1Q9NRR2 321 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 PKDREJQ9NTG1 2253 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 WIPF2Q8TF74 440 aaPredicted RBP16.36■□□□□ 0.21
TMEM260-203ENST00000539559 SAP30LQ9HAJ7 183 aa16.36■□□□□ 0.21
TMEM260-203ENST00000539559 SLC25A5P05141 298 aaKnown RBP16.35■□□□□ 0.21
TMEM260-203ENST00000539559 FAM222BQ8WU58 562 aa16.35■□□□□ 0.21
TMEM260-203ENST00000539559 PGPA6NDG6 321 aa16.35■□□□□ 0.21
TMEM260-203ENST00000539559 GLRXP35754 106 aa16.35■□□□□ 0.21
TMEM260-203ENST00000539559 RBMXL3Q8N7X1 1067 aaKnown RBP16.35■□□□□ 0.21
TMEM260-203ENST00000539559 ZNF714Q96N38 554 aa16.35■□□□□ 0.21
TMEM260-203ENST00000539559 TIMM8BQ9Y5J9 83 aaPredicted RBP16.35■□□□□ 0.21
TMEM260-203ENST00000539559 IGHV2-26A0A0B4J1V2 119 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 H0YJW9 148 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 TOX4O94842 621 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 HCP5Q6MZN7 132 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 ZNF788Q6ZQV5 615 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 Q6ZS92 163 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 OR4F17Q8NGA8 305 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 OR1B1Q8NGR6 318 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 C7orf69Q9H7B7 122 aa16.34■□□□□ 0.21
TMEM260-203ENST00000539559 ZNF430Q9H8G1 570 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms