RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 SLC25A6P12236 298 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 NPPCP23582 126 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 PRSS54Q6PEW0 395 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 Q6ZWC4 215 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 TCF24Q7RTU0 167 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 DTD1Q8TEA8 209 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 ST8SIA2Q92186 375 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 NARS2Q96I59 477 aaKnown RBP8.58□□□□□ -1.04
RTN3-209ENST00000538995 METTL26Q96S19 204 aa8.58□□□□□ -1.04
RTN3-209ENST00000538995 NAP1L6A6NFF2 107 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 DFFBO76075 338 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 CRYBB3P26998 211 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 OR10J1P30954 320 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 RND2P52198 227 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 UBE2MP61081 183 aaKnown RBP8.57□□□□□ -1.04
RTN3-209ENST00000538995 YPEL3P61236 119 aaPredicted RBP8.57□□□□□ -1.04
RTN3-209ENST00000538995 RBMS2Q15434 407 aaKnown RBP8.57□□□□□ -1.04
RTN3-209ENST00000538995 WFDC3Q8IUB2 231 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 TMEM170AQ8WVE7 144 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 OVOL2Q9BRP0 275 aa8.57□□□□□ -1.04
RTN3-209ENST00000538995 IGHV3OR16-13A0A075B7E8 117 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 IGHV3-74A0A0B4J1X5 117 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 FAM90A26D6RGX4 464 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 PITX3O75364 302 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 NXPH3O95157 252 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 SFT2D2O95562 160 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 IFNA10P01566 189 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 APOHP02749 345 aaPredicted RBP8.56□□□□□ -1.04
RTN3-209ENST00000538995 VAMP1P23763 118 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 INPP1P49441 399 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 MLANAQ16655 118 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 TIGITQ495A1 244 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 TRIQKQ629K1 86 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 CENPSQ8N2Z9 138 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 STPG3Q8N7X2 389 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 OR1S1Q8NH92 325 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 Q8WTZ3 238 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 MS4A6AQ9H2W1 248 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 RBKSQ9H477 322 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 MAP6D1Q9H9H5 199 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 TMED3Q9Y3Q3 217 aa8.56□□□□□ -1.04
RTN3-209ENST00000538995 SACSQ9NZJ4 4579 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 RYR2Q92736 4967 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 DNASE2O00115 360 aaPredicted RBP8.55□□□□□ -1.04
RTN3-209ENST00000538995 TFPI2P48307 235 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 EIF2B2P49770 351 aaKnown RBP8.55□□□□□ -1.04
RTN3-209ENST00000538995 PPP1R1AQ13522 171 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 GRAMD2BQ96HH9 432 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 LYSTQ99698 3801 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 NDUFA13Q9P0J0 144 aa8.55□□□□□ -1.04
RTN3-209ENST00000538995 IGKV3-7A0A075B6H7 116 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 IGHV3-66A0A0C4DH42 116 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 SPRY2O43597 315 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 MED6O75586 246 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 NDUFB6O95139 128 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 TOMM40O96008 361 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 IFNA4P05014 189 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 HNRNPCP07910 306 aaKnown RBP eCLIP8.54□□□□□ -1.043e-6■■■□□ 17
RTN3-209ENST00000538995 ATF4P18848 351 aaPredicted RBP8.54□□□□□ -1.04
RTN3-209ENST00000538995 GPX4P36969 197 aaPredicted RBP8.54□□□□□ -1.04
RTN3-209ENST00000538995 P2RY1P47900 373 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 GBGT1Q8N5D6 347 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 NPIPB3Q92617 1050 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 ACY3Q96HD9 319 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 CIB3Q96Q77 187 aaPredicted RBP8.54□□□□□ -1.04
RTN3-209ENST00000538995 C7orf50Q9BRJ6 194 aaKnown RBP8.54□□□□□ -1.04
RTN3-209ENST00000538995 U3KQE9 123 aa8.54□□□□□ -1.04
RTN3-209ENST00000538995 TENM2Q9NT68 2774 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 HELTA6NFD8 242 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 CENPXA8MT69 81 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 IL4P05112 153 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 RD3LP0DJH9 198 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 RPL35AP18077 110 aaKnown RBP8.53□□□□□ -1.04
RTN3-209ENST00000538995 NUP62P37198 522 aaPredicted RBP8.53□□□□□ -1.04
RTN3-209ENST00000538995 RPL11P62913 178 aaKnown RBP8.53□□□□□ -1.04
RTN3-209ENST00000538995 BAK1Q16611 211 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 DEFB135Q30KP9 77 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 RNF183Q96D59 192 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 SLC35E1Q96K37 410 aa8.53□□□□□ -1.04
RTN3-209ENST00000538995 LCE6AA0A183 80 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 K7EQG2 157 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 FABP1P07148 127 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 AP2S1P53680 142 aaPredicted RBP8.52□□□□□ -1.05
RTN3-209ENST00000538995 RAB11AP62491 216 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 RPP30P78346 268 aaKnown RBP8.52□□□□□ -1.05
RTN3-209ENST00000538995 CNPY1Q3B7I2 92 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 STXBP6Q8NFX7 210 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 DCANP1Q8TF63 244 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 GATAD1Q8WUU5 269 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 GLMPQ8WWB7 406 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 SDHCQ99643 169 aaPredicted RBP8.52□□□□□ -1.05
RTN3-209ENST00000538995 CSTL1Q9H114 145 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 PFDN2Q9UHV9 154 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 RABAC1Q9UI14 185 aa8.52□□□□□ -1.05
RTN3-209ENST00000538995 C9orf170A2RU37 121 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 MPTX1A8MV57 137 aa8.51□□□□□ -1.05
RTN3-209ENST00000538995 SYNGR2O43760 224 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms