RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 PUS1Q9Y606 427 aaKnown RBP eCLIP4.87□□□□□ -1.63
CMTM1-220ENST00000534143 TNCP24821 2201 aa4.87□□□□□ -1.63
CMTM1-220ENST00000534143 CSPG4Q6UVK1 2322 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 MDFIC2A0A1B0GVS7 189 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 A6NDX4 124 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 FAM90A26D6RGX4 464 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 H0YIZ8 118 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 PHOX2AO14813 284 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 NBR2O15453 112 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 PLXNB1O43157 2135 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 CYB5BO43169 146 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 ST8SIA3O43173 380 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 SLC25A17O43808 307 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 KBTBD11O94819 623 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 IFNA1P01562 189 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 MBPP02686 304 aaPredicted RBP4.86□□□□□ -1.63
CMTM1-220ENST00000534143 FAM157CP0CG43 387 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 FAM106CPP0CH98 169 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 RPL12P30050 165 aaKnown RBP4.86□□□□□ -1.63
CMTM1-220ENST00000534143 AKR1C3P42330 323 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 IER3P46695 156 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 RAB32Q13637 225 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 GAMTQ14353 236 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 HES1Q14469 280 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 JOSD1Q15040 202 aaPredicted RBP4.86□□□□□ -1.63
CMTM1-220ENST00000534143 VMA21Q3ZAQ7 101 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 PDLIM3Q53GG5 364 aaPredicted RBP4.86□□□□□ -1.63
CMTM1-220ENST00000534143 Q6YL49 198 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 IL17RELQ6ZVW7 336 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 ZNF429Q86V71 674 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 HIST3H2BBQ8N257 126 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 Q8N9W7 124 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 OR52E5Q8NH55 327 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 VSTM2AQ8TAG5 236 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 C22orf15Q8WYQ4 148 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 ISOC2Q96AB3 205 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 OR5B12Q96R08 314 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 C20orf24Q9BUV8 137 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 RNF126Q9BV68 326 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 PRO1933Q9H354 126 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 FBXL15Q9H469 300 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM14BQ9NUH8 114 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 GSKIPQ9P0R6 139 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 TCF19Q9Y242 345 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 FOXA2Q9Y261 457 aaPredicted RBP4.86□□□□□ -1.63
CMTM1-220ENST00000534143 NSG2Q9Y328 171 aa4.86□□□□□ -1.63
CMTM1-220ENST00000534143 FN1P02751 2386 aaKnown RBP4.86□□□□□ -1.63
CMTM1-220ENST00000534143 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 CGB1A6NKQ9 187 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 C15orf61A6NNL5 157 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 ZNF705GA8MUZ8 300 aaPredicted RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 E5RGE8 158 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 E7EUB6 86 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 H3BUX3 64 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 FCN1O00602 326 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 GPR137BO60478 399 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 OPN1MWP04001 364 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 AMY1AP04745 511 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 OPN1MW2P0DN77 364 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 OPN1MW3P0DN78 364 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 MYOD1P15172 320 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 ZNF25P17030 456 aaPredicted RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM11P17152 192 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 G0S2P27469 103 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 SRP14P37108 136 aaKnown RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 NKX2-1P43699 371 aaPredicted RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 PAX9P55771 341 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 HSPE1P61604 102 aaKnown RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 SSBP2P81877 361 aaPredicted RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 ZNF266Q14584 549 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 MMDQ15546 238 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 PRSS8Q16651 343 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 C5orf64Q2M2E5 130 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 SMIM15Q7Z3B0 74 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 SLC35E3Q7Z769 313 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 PPP1R27Q86WC6 154 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 TMEM183AQ8IXX5 376 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 MMD2Q8IY49 270 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 OR4A16Q8NH70 328 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 RNASEH2CQ8TDP1 164 aaKnown RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 ACY3Q96HD9 319 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 FAM210BQ96KR6 192 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 QTRT1Q9BXR0 403 aaKnown RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 ACTR3CQ9C0K3 210 aaPredicted RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 CTDSP1Q9GZU7 261 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 SLC25A31Q9H0C2 315 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 ZNF430Q9H8G1 570 aaPredicted RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 CYTL1Q9NRR1 136 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 FKBP11Q9NYL4 201 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 C1RLQ9NZP8 487 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 HSPB7Q9UBY9 170 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 PRNDQ9UKY0 176 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 RCL1Q9Y2P8 373 aaKnown RBP4.85□□□□□ -1.63
CMTM1-220ENST00000534143 ZNF257Q9Y2Q1 563 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 FBXO7Q9Y3I1 522 aa4.85□□□□□ -1.63
CMTM1-220ENST00000534143 RBFOX3A6NFN3 312 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 CLDN34H7C241 214 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 DLEU1O43261 78 aa4.84□□□□□ -1.63
CMTM1-220ENST00000534143 HOXA3O43365 443 aaPredicted RBP4.84□□□□□ -1.63
CMTM1-220ENST00000534143 SYNGR2O43760 224 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms