RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 OVOL2Q9BRP0 275 aa16.51■□□□□ 0.23
BEST1-207ENST00000533521 CSMD3Q7Z407 3707 aa16.51■□□□□ 0.23
BEST1-207ENST00000533521 IGHV3-49A0A0A0MS15 119 aa16.5■□□□□ 0.23
BEST1-207ENST00000533521 PITX3O75364 302 aa16.5■□□□□ 0.23
BEST1-207ENST00000533521 DFFBO76075 338 aa16.5■□□□□ 0.23
BEST1-207ENST00000533521 TMED4Q7Z7H5 227 aa16.5■□□□□ 0.23
BEST1-207ENST00000533521 DTD1Q8TEA8 209 aa16.5■□□□□ 0.23
BEST1-207ENST00000533521 PRR13Q9NZ81 148 aa16.5■□□□□ 0.23
BEST1-207ENST00000533521 UBQLN2Q9UHD9 624 aa16.5■□□□□ 0.23
BEST1-207ENST00000533521 TENM2Q9NT68 2774 aa16.49■□□□□ 0.23
BEST1-207ENST00000533521 NAP1L6A6NFF2 107 aa16.49■□□□□ 0.23
BEST1-207ENST00000533521 FAM90A26D6RGX4 464 aa16.49■□□□□ 0.23
BEST1-207ENST00000533521 RBMS2Q15434 407 aaKnown RBP16.49■□□□□ 0.23
BEST1-207ENST00000533521 Q8WTZ3 238 aa16.49■□□□□ 0.23
BEST1-207ENST00000533521 NARS2Q96I59 477 aaKnown RBP16.49■□□□□ 0.23
BEST1-207ENST00000533521 TMED3Q9Y3Q3 217 aa16.49■□□□□ 0.23
BEST1-207ENST00000533521 U3KQE9 123 aa16.49■□□□□ 0.23
BEST1-207ENST00000533521 IFNA10P01566 189 aa16.48■□□□□ 0.23
BEST1-207ENST00000533521 APOHP02749 345 aaPredicted RBP16.48■□□□□ 0.23
BEST1-207ENST00000533521 RND2P52198 227 aa16.48■□□□□ 0.23
BEST1-207ENST00000533521 CENPSQ8N2Z9 138 aa16.48■□□□□ 0.23
BEST1-207ENST00000533521 STPG3Q8N7X2 389 aa16.48■□□□□ 0.23
BEST1-207ENST00000533521 RBKSQ9H477 322 aa16.48■□□□□ 0.23
BEST1-207ENST00000533521 MAP6D1Q9H9H5 199 aa16.48■□□□□ 0.23
BEST1-207ENST00000533521 SFT2D2O95562 160 aa16.47■□□□□ 0.23
BEST1-207ENST00000533521 VAMP1P23763 118 aa16.47■□□□□ 0.23
BEST1-207ENST00000533521 OR10J1P30954 320 aa16.47■□□□□ 0.23
BEST1-207ENST00000533521 GPX4P36969 197 aaPredicted RBP16.47■□□□□ 0.23
BEST1-207ENST00000533521 TIGITQ495A1 244 aa16.47■□□□□ 0.23
BEST1-207ENST00000533521 LILRB2Q8N423 598 aa16.47■□□□□ 0.23
BEST1-207ENST00000533521 OR1S1Q8NH92 325 aa16.47■□□□□ 0.23
BEST1-207ENST00000533521 MS4A6AQ9H2W1 248 aa16.47■□□□□ 0.23
BEST1-207ENST00000533521 IGHV3OR16-13A0A075B7E8 117 aa16.46■□□□□ 0.23
BEST1-207ENST00000533521 IGHV3-74A0A0B4J1X5 117 aa16.46■□□□□ 0.23
BEST1-207ENST00000533521 ATF4P18848 351 aaPredicted RBP16.46■□□□□ 0.23
BEST1-207ENST00000533521 GRAMD2BQ96HH9 432 aa16.46■□□□□ 0.23
BEST1-207ENST00000533521 SPRY2O43597 315 aa16.45■□□□□ 0.22
BEST1-207ENST00000533521 MED6O75586 246 aa16.45■□□□□ 0.22
BEST1-207ENST00000533521 PPP1R1AQ13522 171 aa16.45■□□□□ 0.22
BEST1-207ENST00000533521 ZFAND6Q6FIF0 208 aa16.45■□□□□ 0.22
BEST1-207ENST00000533521 NPIPB3Q92617 1050 aa16.45■□□□□ 0.22
BEST1-207ENST00000533521 RNF183Q96D59 192 aa16.45■□□□□ 0.22
BEST1-207ENST00000533521 DNASE2O00115 360 aaPredicted RBP16.44■□□□□ 0.22
BEST1-207ENST00000533521 TOMM40O96008 361 aa16.44■□□□□ 0.22
BEST1-207ENST00000533521 P2RY1P47900 373 aa16.44■□□□□ 0.22
BEST1-207ENST00000533521 INPP1P49441 399 aa16.44■□□□□ 0.22
BEST1-207ENST00000533521 EIF2B2P49770 351 aaKnown RBP16.44■□□□□ 0.22
BEST1-207ENST00000533521 TRIQKQ629K1 86 aa16.44■□□□□ 0.22
BEST1-207ENST00000533521 GBGT1Q8N5D6 347 aa16.44■□□□□ 0.22
BEST1-207ENST00000533521 C7orf50Q9BRJ6 194 aaKnown RBP16.44■□□□□ 0.22
BEST1-207ENST00000533521 NDUFB6O95139 128 aa16.43■□□□□ 0.22
BEST1-207ENST00000533521 NXPH3O95157 252 aa16.43■□□□□ 0.22
BEST1-207ENST00000533521 HNRNPCP07910 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
BEST1-207ENST00000533521 TFPI2P48307 235 aa16.43■□□□□ 0.22
BEST1-207ENST00000533521 AP2S1P53680 142 aaPredicted RBP16.43■□□□□ 0.22
BEST1-207ENST00000533521 BAK1Q16611 211 aa16.43■□□□□ 0.22
BEST1-207ENST00000533521 CNPY1Q3B7I2 92 aa16.43■□□□□ 0.22
BEST1-207ENST00000533521 APRG1Q8IVJ8 170 aa16.43■□□□□ 0.22
BEST1-207ENST00000533521 CIB3Q96Q77 187 aaPredicted RBP16.43■□□□□ 0.22
BEST1-207ENST00000533521 CSTL1Q9H114 145 aa16.43■□□□□ 0.22
BEST1-207ENST00000533521 IGKV3-7A0A075B6H7 116 aa16.42■□□□□ 0.22
BEST1-207ENST00000533521 LCE6AA0A183 80 aa16.42■□□□□ 0.22
BEST1-207ENST00000533521 HELTA6NFD8 242 aa16.42■□□□□ 0.22
BEST1-207ENST00000533521 K7EQG2 157 aa16.42■□□□□ 0.22
BEST1-207ENST00000533521 IFNA4P05014 189 aa16.42■□□□□ 0.22
BEST1-207ENST00000533521 RD3LP0DJH9 198 aa16.42■□□□□ 0.22
BEST1-207ENST00000533521 RPL11P62913 178 aaKnown RBP16.42■□□□□ 0.22
BEST1-207ENST00000533521 SEPSECSQ9HD40 501 aaKnown RBP16.42■□□□□ 0.22
BEST1-207ENST00000533521 RYR3Q15413 4870 aa16.42■□□□□ 0.22
BEST1-207ENST00000533521 IGHV3-66A0A0C4DH42 116 aa16.41■□□□□ 0.22
BEST1-207ENST00000533521 CENPXA8MT69 81 aa16.41■□□□□ 0.22
BEST1-207ENST00000533521 RAB11AP62491 216 aa16.41■□□□□ 0.22
BEST1-207ENST00000533521 RPP30P78346 268 aaKnown RBP16.41■□□□□ 0.22
BEST1-207ENST00000533521 DEFB135Q30KP9 77 aa16.41■□□□□ 0.22
BEST1-207ENST00000533521 C16orf54Q6UWD8 224 aa16.41■□□□□ 0.22
BEST1-207ENST00000533521 GATAD1Q8WUU5 269 aa16.41■□□□□ 0.22
BEST1-207ENST00000533521 ACY3Q96HD9 319 aa16.41■□□□□ 0.22
BEST1-207ENST00000533521 SDHCQ99643 169 aaPredicted RBP16.41■□□□□ 0.22
BEST1-207ENST00000533521 MPTX1A8MV57 137 aa16.4■□□□□ 0.22
BEST1-207ENST00000533521 RPL35AP18077 110 aaKnown RBP16.4■□□□□ 0.22
BEST1-207ENST00000533521 NUP62P37198 522 aaPredicted RBP16.4■□□□□ 0.22
BEST1-207ENST00000533521 DCANP1Q8TF63 244 aa16.4■□□□□ 0.22
BEST1-207ENST00000533521 GLMPQ8WWB7 406 aa16.4■□□□□ 0.22
BEST1-207ENST00000533521 PFDN2Q9UHV9 154 aa16.4■□□□□ 0.22
BEST1-207ENST00000533521 DYNC2H1Q8NCM8 4307 aaKnown RBP16.4■□□□□ 0.22
BEST1-207ENST00000533521 C9orf170A2RU37 121 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 IL4P05112 153 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 FABP1P07148 127 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 PSG1P11464 419 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 GAMTQ14353 236 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 USF2Q15853 346 aaPredicted RBP16.39■□□□□ 0.21
BEST1-207ENST00000533521 OR51G1Q8NGK1 321 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 SLC35E1Q96K37 410 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 RABAC1Q9UI14 185 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 STARD9Q9P2P6 4700 aa16.39■□□□□ 0.21
BEST1-207ENST00000533521 BUB3O43684 328 aa16.38■□□□□ 0.21
BEST1-207ENST00000533521 SYNGR2O43760 224 aa16.38■□□□□ 0.21
BEST1-207ENST00000533521 DEFB131AP59861 70 aa16.38■□□□□ 0.21
BEST1-207ENST00000533521 OR8G2PQ6IF36 304 aa16.38■□□□□ 0.21
BEST1-207ENST00000533521 IL7P13232 177 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms