RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 LILRB2Q8N423 598 aa22.48■■□□□ 1.19
SSSCA1-207ENST00000533115 OR1S2Q8NGQ3 325 aa22.48■■□□□ 1.19
SSSCA1-207ENST00000533115 RYR3Q15413 4870 aa22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 IGHV3-66A0A0C4DH42 116 aa22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 IGLC1P0CG04 106 aa22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 CMC4P56277 68 aaPredicted RBP22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 PAFAH1B2P68402 229 aa22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 GBGT1Q8N5D6 347 aa22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 NDUFA13Q9P0J0 144 aa22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 CSMD3Q7Z407 3707 aa22.47■■□□□ 1.19
SSSCA1-207ENST00000533115 NAP1L6A6NFF2 107 aa22.46■■□□□ 1.19
SSSCA1-207ENST00000533115 PITX3O75364 302 aa22.46■■□□□ 1.19
SSSCA1-207ENST00000533115 METTL26Q96S19 204 aa22.46■■□□□ 1.19
SSSCA1-207ENST00000533115 TMEM231Q9H6L2 316 aa22.46■■□□□ 1.19
SSSCA1-207ENST00000533115 DFFBO76075 338 aa22.45■■□□□ 1.18
SSSCA1-207ENST00000533115 CRYBB3P26998 211 aa22.45■■□□□ 1.18
SSSCA1-207ENST00000533115 OR10J1P30954 320 aa22.45■■□□□ 1.18
SSSCA1-207ENST00000533115 APOC4P55056 127 aa22.45■■□□□ 1.18
SSSCA1-207ENST00000533115 ZFAND6Q6FIF0 208 aa22.45■■□□□ 1.18
SSSCA1-207ENST00000533115 SDHCQ99643 169 aaPredicted RBP22.45■■□□□ 1.18
SSSCA1-207ENST00000533115 A0A1W2PS18 150 aa22.44■■□□□ 1.18
SSSCA1-207ENST00000533115 SLC25A6P12236 298 aa22.44■■□□□ 1.18
SSSCA1-207ENST00000533115 YPEL3P61236 119 aaPredicted RBP22.44■■□□□ 1.18
SSSCA1-207ENST00000533115 APRG1Q8IVJ8 170 aa22.44■■□□□ 1.18
SSSCA1-207ENST00000533115 NPIPB3Q92617 1050 aa22.44■■□□□ 1.18
SSSCA1-207ENST00000533115 OVOL2Q9BRP0 275 aa22.44■■□□□ 1.18
SSSCA1-207ENST00000533115 TMED3Q9Y3Q3 217 aa22.44■■□□□ 1.18
SSSCA1-207ENST00000533115 ATP5IP56385 69 aaPredicted RBP22.43■■□□□ 1.18
SSSCA1-207ENST00000533115 UBE2MP61081 183 aaKnown RBP22.43■■□□□ 1.18
SSSCA1-207ENST00000533115 Q8WTZ3 238 aa22.43■■□□□ 1.18
SSSCA1-207ENST00000533115 ACY3Q96HD9 319 aa22.43■■□□□ 1.18
SSSCA1-207ENST00000533115 MS4A6AQ9H2W1 248 aa22.43■■□□□ 1.18
SSSCA1-207ENST00000533115 STARD9Q9P2P6 4700 aa22.43■■□□□ 1.18
SSSCA1-207ENST00000533115 NDUFB6O95139 128 aa22.42■■□□□ 1.18
SSSCA1-207ENST00000533115 RPL11P62913 178 aaKnown RBP22.42■■□□□ 1.18
SSSCA1-207ENST00000533115 WFDC3Q8IUB2 231 aa22.42■■□□□ 1.18
SSSCA1-207ENST00000533115 KIR2DL5BA0A0G2JN68 375 aa22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 KIR2DL5BA0A0G2JPC4 375 aa22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 DNASE2O00115 360 aaPredicted RBP22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 UBE2CO00762 179 aa22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 IFNA4P05014 189 aa22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 KIR2DL5AQ8N109 375 aa22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 KIR2DL5BQ8NHK3 375 aa22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 NARS2Q96I59 477 aaKnown RBP22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 MAP6D1Q9H9H5 199 aa22.41■■□□□ 1.18
SSSCA1-207ENST00000533115 TRAV2A0A0B4J234 112 aa22.4■■□□□ 1.18
SSSCA1-207ENST00000533115 LINC00854A0A1B0GVQ3 168 aa22.4■■□□□ 1.18
SSSCA1-207ENST00000533115 FAM90A26D6RGX4 464 aa22.4■■□□□ 1.18
SSSCA1-207ENST00000533115 RPL35AP18077 110 aaKnown RBP22.4■■□□□ 1.18
SSSCA1-207ENST00000533115 ZNF124Q15973 351 aa22.4■■□□□ 1.18
SSSCA1-207ENST00000533115 Q6ZWC4 215 aa22.4■■□□□ 1.18
SSSCA1-207ENST00000533115 HOXB5P09067 269 aa22.39■■□□□ 1.17
SSSCA1-207ENST00000533115 P2RY1P47900 373 aa22.39■■□□□ 1.17
SSSCA1-207ENST00000533115 STPG3Q8N7X2 389 aa22.39■■□□□ 1.17
SSSCA1-207ENST00000533115 TP53TG1Q9Y2A0 90 aa22.39■■□□□ 1.17
SSSCA1-207ENST00000533115 DYNC2H1Q8NCM8 4307 aaKnown RBP22.39■■□□□ 1.17
SSSCA1-207ENST00000533115 C9orf170A2RU37 121 aa22.38■■□□□ 1.17
SSSCA1-207ENST00000533115 CENPXA8MT69 81 aa22.38■■□□□ 1.17
SSSCA1-207ENST00000533115 IL7P13232 177 aa22.38■■□□□ 1.17
SSSCA1-207ENST00000533115 C7orf50Q9BRJ6 194 aaKnown RBP22.38■■□□□ 1.17
SSSCA1-207ENST00000533115 FLVCR2Q9UPI3 526 aa22.38■■□□□ 1.17
SSSCA1-207ENST00000533115 U3KQE9 123 aa22.38■■□□□ 1.17
SSSCA1-207ENST00000533115 MED6O75586 246 aa22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 TOMM40O96008 361 aa22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 IAPPP10997 89 aa22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 GPX4P36969 197 aaPredicted RBP22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 GGNBP1Q5YKI7 109 aa22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 IL17DQ8TAD2 202 aa22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 GRAMD2BQ96HH9 432 aa22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 RABAC1Q9UI14 185 aa22.37■■□□□ 1.17
SSSCA1-207ENST00000533115 SPRY2O43597 315 aa22.36■■□□□ 1.17
SSSCA1-207ENST00000533115 IL4P05112 153 aa22.36■■□□□ 1.17
SSSCA1-207ENST00000533115 HNRNPCP07910 306 aaKnown RBP eCLIP22.36■■□□□ 1.17
SSSCA1-207ENST00000533115 RD3LP0DJH9 198 aa22.36■■□□□ 1.17
SSSCA1-207ENST00000533115 BTCP35070 178 aa22.36■■□□□ 1.17
SSSCA1-207ENST00000533115 DEFB135Q30KP9 77 aa22.36■■□□□ 1.17
SSSCA1-207ENST00000533115 RAB11AP62491 216 aa22.35■■□□□ 1.17
SSSCA1-207ENST00000533115 GAMTQ14353 236 aa22.35■■□□□ 1.17
SSSCA1-207ENST00000533115 USF2Q15853 346 aaPredicted RBP22.35■■□□□ 1.17
SSSCA1-207ENST00000533115 SLC35E1Q96K37 410 aa22.35■■□□□ 1.17
SSSCA1-207ENST00000533115 FAM24BQ8N5W8 94 aa22.34■■□□□ 1.17
SSSCA1-207ENST00000533115 STXBP6Q8NFX7 210 aa22.34■■□□□ 1.17
SSSCA1-207ENST00000533115 CIB3Q96Q77 187 aaPredicted RBP22.34■■□□□ 1.17
SSSCA1-207ENST00000533115 MAGT1Q9H0U3 335 aa22.34■■□□□ 1.17
SSSCA1-207ENST00000533115 SYNGR2O43760 224 aa22.33■■□□□ 1.17
SSSCA1-207ENST00000533115 OR4E1P0C645 316 aa22.33■■□□□ 1.17
SSSCA1-207ENST00000533115 PSG1P11464 419 aa22.33■■□□□ 1.17
SSSCA1-207ENST00000533115 DEFB131AP59861 70 aa22.33■■□□□ 1.17
SSSCA1-207ENST00000533115 DHRS2Q13268 280 aa22.33■■□□□ 1.17
SSSCA1-207ENST00000533115 COQ8AQ8NI60 647 aa22.33■■□□□ 1.17
SSSCA1-207ENST00000533115 RNF183Q96D59 192 aa22.33■■□□□ 1.17
SSSCA1-207ENST00000533115 K7EQG2 157 aa22.32■■□□□ 1.16
SSSCA1-207ENST00000533115 ADAP1O75689 374 aa22.32■■□□□ 1.16
SSSCA1-207ENST00000533115 C16orf54Q6UWD8 224 aa22.32■■□□□ 1.16
SSSCA1-207ENST00000533115 CSTL1Q9H114 145 aa22.32■■□□□ 1.16
SSSCA1-207ENST00000533115 PAIP2BQ9ULR5 123 aaKnown RBP22.32■■□□□ 1.16
SSSCA1-207ENST00000533115 HELTA6NFD8 242 aa22.31■■□□□ 1.16
SSSCA1-207ENST00000533115 EIF2B2P49770 351 aaKnown RBP22.31■■□□□ 1.16
SSSCA1-207ENST00000533115 RPP30P78346 268 aaKnown RBP22.31■■□□□ 1.16
SSSCA1-207ENST00000533115 LYG2Q86SG7 212 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms