RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 ZNF562Q6V9R5 426 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 NIT1Q86X76 327 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 PTPRDP23468 1912 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 TRAV14DV4A0A0A6YYC5 116 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 LY6G6EA0A0G2JKS1 128 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 LINC00587B1AMM8 73 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 K7ENP7 123 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 GCHFRP30047 84 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 ARTNQ5T4W7 220 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 MORN3Q6PF18 240 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-232ENST00000532649 ANAPC10Q9UM13 185 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 U3KQA8 63 aa7.28□□□□□ -1.24
CTNND1-232ENST00000532649 C17orf98A8MV24 154 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 C1QL1O75973 258 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 AGAP20933 346 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 RBMY1FQ15415 496 aaKnown RBP7.27□□□□□ -1.25
CTNND1-232ENST00000532649 CITED1Q99966 193 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 IGKV1-9A0A0C4DH69 117 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 CCL1P22362 96 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 SMIM8Q96KF7 97 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 SLC50A1Q9BRV3 221 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 CGB7P0DN87 165 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 CRYGSP22914 178 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 KIAA1644Q3SXP7 199 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 CENPWQ5EE01 88 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 NABP1Q96AH0 204 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 TRAV2A0A0B4J234 112 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 TRGC2P03986 189 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 ATOH7Q8N100 152 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 ESPL1Q14674 2120 aa7.27□□□□□ -1.25
CTNND1-232ENST00000532649 CA7P43166 264 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 FAM166AQ6J272 317 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 PAQR4Q8N4S7 273 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 PRSS33Q8NF86 280 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 IFI27L2Q9H2X8 130 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 LGALS1P09382 135 aaKnown RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 H2BFSP57053 126 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 ATXN8Q156A1 80 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 ZNF672Q499Z4 452 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 Q6AWC8 147 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 SPCS1Q9Y6A9 102 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 GZMBP10144 247 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 RPL35AP18077 110 aaKnown RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 ZNF585BQ52M93 769 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 GATAD1Q8WUU5 269 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 CRIM1Q9NZV1 1036 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 COX11Q9Y6N1 276 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 MUC21A0A0G2JKD1 596 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 MUC21A0A140T8X8 626 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 GRIFINA4D1Z8 144 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 TMEM8BA6NDV4 472 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 MBD3L4A6NDZ8 208 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 MBD3L3A6NE82 208 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 MBD3L5A6NJ08 208 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 E9PQ18 207 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 SRSF4Q08170 494 aaKnown RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 CIARTQ8N365 385 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 MBD3L2Q8NHZ7 208 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 IGHG3P01860 377 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 WNT2P09544 360 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 FREM3P0C091 2139 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 RPP21Q9H633 154 aaKnown RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 SEPSECSQ9HD40 501 aaKnown RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 NRN1Q9NPD7 142 aa7.26□□□□□ -1.25
CTNND1-232ENST00000532649 SNRNP200O75643 2136 aaKnown RBP7.26□□□□□ -1.25
CTNND1-232ENST00000532649 ANAPC1Q9H1A4 1944 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 SAA2-SAA4A0A096LPE2 208 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 SAA2P0DJI9 122 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-232ENST00000532649 PLNP26678 52 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 B3GALT5-AS1P59052 145 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 CTAG1AP78358 180 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 SRSF1Q07955 248 aaKnown RBP eCLIP7.25□□□□□ -1.251e-7■□□□□ 10.7
CTNND1-232ENST00000532649 PRR30Q53SZ7 412 aaPredicted RBP7.25□□□□□ -1.25
CTNND1-232ENST00000532649 ASCL2Q99929 193 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 TMEM133Q9H2Q1 129 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 NBEAP1P0C6P0 100 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 ZNF257Q9Y2Q1 563 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 DMRT1Q9Y5R6 373 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 M0R2P5 195 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 NBR2O15453 112 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 PSMG4Q5JS54 123 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 MYO7BQ6PIF6 2116 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 GLRX5Q86SX6 157 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 RCHY1Q96PM5 261 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 NBL1P41271 181 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 SUMO4Q6EEV6 95 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
CTNND1-232ENST00000532649 C1QTNF9P0C862 333 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 CD24P25063 80 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 EFNA4P52798 201 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 ZNF497Q6ZNH5 498 aa7.25□□□□□ -1.25
CTNND1-232ENST00000532649 FANCMQ8IYD8 2048 aa7.24□□□□□ -1.25
CTNND1-232ENST00000532649 TRAV40A0A0B4J280 105 aa7.24□□□□□ -1.25
CTNND1-232ENST00000532649 A0A1B0GUT8 65 aa7.24□□□□□ -1.25
CTNND1-232ENST00000532649 PAX4O43316 350 aa7.24□□□□□ -1.25
CTNND1-232ENST00000532649 RND3P61587 244 aa7.24□□□□□ -1.25
CTNND1-232ENST00000532649 GAGE2EQ4V326 116 aa7.24□□□□□ -1.25
CTNND1-232ENST00000532649 LURAP1LQ8IV03 231 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms