RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 A6NHS1 94 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 CRYM-AS1A6NIL9 109 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 K7EQG2 157 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 ANXA3P12429 323 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 NPPCP23582 126 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 CRYBB3P26998 211 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 OPRK1P41145 380 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 PRR20EP86478 221 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 PRR20CP86479 221 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 PRR20DP86480 221 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 PRR20BP86481 221 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 PRR20AP86496 221 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 TMEM41BQ5BJD5 291 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 TRPT1Q86TN4 253 aaKnown RBP8.26□□□□□ -1.09
VPS28-214ENST00000531032 STHQ8IWL8 128 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 TOMM5Q8N4H5 51 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 OR4X1Q8NH49 305 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 GRAMD2BQ96HH9 432 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 METTL26Q96S19 204 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 RTBDNQ9BSG5 229 aaPredicted RBP8.26□□□□□ -1.09
VPS28-214ENST00000531032 CACNG5Q9UF02 275 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 KCNIP3Q9Y2W7 256 aa8.26□□□□□ -1.09
VPS28-214ENST00000531032 A0A0G2JRQ6 117 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 CEBPZOSA8MTT3 80 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 C11orf94C9JXX5 98 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 CDS2O95674 445 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 IGKV1-17P01599 117 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 SPP1P10451 314 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 AKR1C4P17516 323 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 ETV6P41212 452 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 P2RY1P47900 373 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 INPP1P49441 399 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 AARDQ4LEZ3 155 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 STXBP6Q8NFX7 210 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 DCANP1Q8TF63 244 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 KRTAP17-1Q9BYP8 105 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.25□□□□□ -1.09
VPS28-214ENST00000531032 GPR132Q9UNW8 380 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 AGRNO00468 2067 aa8.25□□□□□ -1.09
VPS28-214ENST00000531032 IGHV4-28A0A0C4DH34 117 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 RPS10-NUDT3A0A1W2PQS6 291 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 ZNF705EA8MWA4 302 aaPredicted RBP8.24□□□□□ -1.09
VPS28-214ENST00000531032 ZNF701M0R085 212 aaPredicted RBP8.24□□□□□ -1.09
VPS28-214ENST00000531032 NXPH3O95157 252 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 RBMY1A1P0DJD3 496 aaKnown RBP8.24□□□□□ -1.09
VPS28-214ENST00000531032 RBMY1CP0DJD4 496 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 MIFP14174 115 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 C4BPBP20851 252 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 SPCS3P61009 180 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 SRPXP78539 464 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 RBMY1FQ15415 496 aaKnown RBP8.24□□□□□ -1.09
VPS28-214ENST00000531032 MLANAQ16655 118 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 SPANXN2Q5MJ10 180 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 MORN3Q6PF18 240 aaPredicted RBP8.24□□□□□ -1.09
VPS28-214ENST00000531032 Q6ZRM9 215 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 TMED4Q7Z7H5 227 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 SELENOHQ8IZQ5 122 aaKnown RBP8.24□□□□□ -1.09
VPS28-214ENST00000531032 OR52E5Q8NH55 327 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 LHFPL5Q8TAF8 219 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 GLYATL2Q8WU03 294 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 HEYLQ9NQ87 328 aaPredicted RBP8.24□□□□□ -1.09
VPS28-214ENST00000531032 CACFD1Q9UGQ2 172 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 APLNQ9ULZ1 77 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 U3KQE9 123 aa8.24□□□□□ -1.09
VPS28-214ENST00000531032 DNAH10Q8IVF4 4471 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 TRAV30A0A087WSZ9 112 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 PIGBOS1A0A0B4J2F0 54 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 KNCNA6PVL3 124 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 IGLL5B9A064 214 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 ZNF688P0C7X2 276 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 SULT1A3P0DMM9 295 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 SULT1A4P0DMN0 295 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 HTR2BP41595 481 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 TIGITQ495A1 244 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 LGI3Q8N145 548 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 IL22RA2Q969J5 263 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 TRIM63Q969Q1 353 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 TMEM230Q96A57 120 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 GPR146Q96CH1 333 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 NARS2Q96I59 477 aaKnown RBP8.23□□□□□ -1.09
VPS28-214ENST00000531032 SOSTQ9BQB4 213 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 PRR13Q9NZ81 148 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 X6R8D5 127 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 HECTD4Q9Y4D8 3996 aa8.23□□□□□ -1.09
VPS28-214ENST00000531032 IGLC1P0CG04 106 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 VAMP1P23763 118 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 KLF9Q13886 244 aaPredicted RBP8.22□□□□□ -1.09
VPS28-214ENST00000531032 ACTL10Q5JWF8 245 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 TRIQKQ629K1 86 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 NOXA1Q86UR1 476 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 CSNK1G2-AS1Q8NCQ2 148 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 SLC24A4Q8NFF2 622 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 OR1S2Q8NGQ3 325 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 GLMPQ8WWB7 406 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 NDUFA13Q9P0J0 144 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 TMEM56-RWDD3S4R434 201 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 V9GYH0 126 aa8.22□□□□□ -1.09
VPS28-214ENST00000531032 HERC2O95714 4834 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms