RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 ETDBQ3ZM63 59 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 LINC01620Q4KN68 170 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 HOGA1Q86XE5 327 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 ABHD12Q8N2K0 398 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 C3orf22Q8N5N4 141 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 CLDN19Q8N6F1 224 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 OTOSQ8NHW6 89 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 PIFOQ8TCI5 191 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 MYOZ3Q8TDC0 251 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 APOBEC4Q8WW27 367 aaKnown RBP3.19□□□□□ -1.9
CTR9-205ENST00000529898 FGF14Q92915 247 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 PRELID3AQ96N28 172 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 CLEC7AQ9BXN2 247 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 SLC39A9Q9NUM3 307 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 HIGD1BQ9P298 99 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 KIF26BQ2KJY2 2108 aa3.19□□□□□ -1.9
CTR9-205ENST00000529898 HTTP42858 3142 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 TMED7-TICAM2A0A0A6YYA0 188 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 C3orf85A0A1B0GTC6 90 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 SMIM28A0A1B0GU29 152 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 RIIAD1A6NNX1 92 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 NDUFC2-KCTD14E9PQ53 114 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 M0R129 80 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 FCN1O00602 326 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 SLC17A2O00624 439 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 LGALS1P09382 135 aaKnown RBP3.18□□□□□ -1.9
CTR9-205ENST00000529898 MPV17P39210 176 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 PGFP49763 221 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 CRYBA2P53672 197 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 HERVK_113P63121 156 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 RPL38P63173 70 aaKnown RBP3.18□□□□□ -1.9
CTR9-205ENST00000529898 PLGLB1Q02325 96 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 HSPB3Q12988 150 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 KLF5Q13887 457 aaPredicted RBP3.18□□□□□ -1.9
CTR9-205ENST00000529898 NUMA1Q14980 2115 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 RNPS1Q15287 305 aaKnown RBP3.18□□□□□ -1.9
CTR9-205ENST00000529898 SPRNQ5BIV9 151 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 NMSQ5H8A3 153 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 ZNF550Q7Z398 422 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 MOB3BQ86TA1 216 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 TEN1Q86WV5 123 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 GAPTQ8N292 157 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 FGFRL1Q8N441 504 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 ZNF645Q8N7E2 425 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 TMEM99Q8N816 258 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 NUP35Q8NFH5 326 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 RNF128Q8TEB7 428 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 SAP25Q8TEE9 199 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 COPS9Q8WXC6 57 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 ELSPBP1Q96BH3 223 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 PELI1Q96FA3 418 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 SLC25A44Q96H78 314 aaPredicted RBP3.18□□□□□ -1.9
CTR9-205ENST00000529898 BMFQ96LC9 184 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 C9orf85Q96MD7 179 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 LINC01600Q96MT4 127 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 C20orf78Q9BR46 151 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 ULBP3Q9BZM4 244 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 PARP12Q9H0J9 701 aaKnown RBP3.18□□□□□ -1.9
CTR9-205ENST00000529898 C5orf66Q9H5L9 145 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 JPT2Q9H910 190 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 PRO0461Q9UI25 63 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 ZNF835Q9Y2P0 537 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 KLF12Q9Y4X4 402 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 CHCHD2Q9Y6H1 151 aaPredicted RBP3.18□□□□□ -1.9
CTR9-205ENST00000529898 MYOFQ9NZM1 2061 aa3.18□□□□□ -1.9
CTR9-205ENST00000529898 SNRNP200O75643 2136 aaKnown RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 SCN2AQ99250 2005 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 NSG1A0A0A6YYJ2 146 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 A0A1B0GWB2 263 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 C1orf226A1L170 272 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 MYBPHLA2RUH7 354 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 C2orf70A6NJV1 201 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CHEK1O14757 476 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 ENSAO43768 121 aaKnown RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 MPDU1O75352 247 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CLDN14O95500 239 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CT62P0C5K7 136 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 LINC00271P0C7V0 271 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CECR9P0C854 216 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 P0DMU3 169 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 FAM231AP0DMU4 169 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 FAM231CP0DMU5 169 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 HLA-DRB4P13762 266 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CPMP14384 443 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 RPL35AP18077 110 aaKnown RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 MDKP21741 143 aaPredicted RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 LEPP41159 167 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 PTGDSP41222 190 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 NBL1P41271 181 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 NMUP48645 174 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 RBM11P57052 281 aaKnown RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 CCL20P78556 96 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 PRDX1Q06830 199 aaKnown RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 VGLL4Q14135 290 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 WFDC2Q14508 124 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 INSL4Q14641 139 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 ZNF791Q3KP31 576 aaPredicted RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 C9orf153Q5TBE3 101 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 LCN12Q6JVE5 192 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms