RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	RRH	O14718	337 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	MT-CO2	P00403	227 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	RPLP1	P05386	114 aa	Known RBP	11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	KIR2DS2	P43631	304 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	ZNF90	Q03938	601 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	GAGE1	Q13065	139 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	MIC13	Q5XKP0	118 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	FAM71F2	Q6NXP2	309 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	ZNF439	Q8NDP4	499 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	OR10X1	Q8NGY0	326 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	OR4A16	Q8NH70	328 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	MRPL18	Q9H0U6	180 aa	Known RBP	11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	C7orf69	Q9H7B7	122 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	BAHCC1	Q9P281	2608 aa		11.72	□□□□□ -0.53
NR1H3-231	ENST00000529540	CRISP2	P16562	243 aa		11.71	□□□□□ -0.53
NR1H3-231	ENST00000529540	CEACAM3	P40198	252 aa		11.71	□□□□□ -0.53
NR1H3-231	ENST00000529540	GPR12	P47775	334 aa		11.71	□□□□□ -0.53
NR1H3-231	ENST00000529540	UBE2E1	P51965	193 aa		11.71	□□□□□ -0.53
NR1H3-231	ENST00000529540	BPIFB3	P59826	476 aa		11.71	□□□□□ -0.53
NR1H3-231	ENST00000529540	MAPK1IP1L	Q8NDC0	245 aa		11.71	□□□□□ -0.53
NR1H3-231	ENST00000529540	UHRF2	Q96PU4	802 aa		11.71	□□□□□ -0.53
NR1H3-231	ENST00000529540	FNDC10	F2Z333	226 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540		K7EN84	100 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	IL6R	P08887	468 aa	Predicted RBP	11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	OR10J4	P0C629	311 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	GNG10	P50151	68 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	ERVK-16	P61578	105 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	RHOB	P62745	196 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	RELB	Q01201	579 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	TMEM183B	Q1AE95	376 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	HLA-DRB5	Q30154	266 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	COX19	Q49B96	90 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	TOMM20L	Q6UXN7	152 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	OR1L6	Q8NGR2	347 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	S1PR3	Q99500	378 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	NPVF	Q9HCQ7	196 aa		11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	HEYL	Q9NQ87	328 aa	Predicted RBP	11.71	□□□□□ -0.54
NR1H3-231	ENST00000529540	SAA2-SAA4	A0A096LPE2	208 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	GRIFIN	A4D1Z8	144 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	SMAD7	O15105	426 aa	Known RBP	11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	FCGR3B	O75015	233 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	PROP1	O75360	226 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	SERF1A	O75920	110 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	IGLV1-47	P01700	117 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	HOXB4	P17483	251 aa	Predicted RBP	11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	CBLN1	P23435	193 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	ZNF137P	P52743	207 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	RPEL1	Q2QD12	228 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	CT45A1	Q5HYN5	189 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	MINOS1	Q5TGZ0	78 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	PNKD	Q8N490	385 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	CT45A3	Q8NHU0	189 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	EAF1	Q96JC9	268 aa	Predicted RBP	11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	GNB1L	Q9BYB4	327 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	IFI27L2	Q9H2X8	130 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	TBL2	Q9Y4P3	447 aa	Known RBP	11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	MINOS1-NBL1	R4GNA1	71 aa		11.7	□□□□□ -0.54
NR1H3-231	ENST00000529540	CD5L	O43866	347 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	MT-ND6	P03923	174 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	ZNF25	P17030	456 aa	Predicted RBP	11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	COX7A1	P24310	79 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	HTR1D	P28221	377 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	RPL29	P47914	159 aa	Known RBP	11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	ZNF134	P52741	427 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	LYG1	Q8N1E2	194 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	OR5AU1	Q8NGC0	362 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	LEAP2	Q969E1	77 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	HSPB9	Q9BQS6	159 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	TCF19	Q9Y242	345 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	CREBBP	Q92793	2442 aa		11.69	□□□□□ -0.54
NR1H3-231	ENST00000529540	ODF3B	A8MYP8	253 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	OOSP1	A8MZH6	123 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	DLEU1	O43261	78 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	G0S2	P27469	103 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	THBS3	P49746	956 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	LINC00205	P59089	165 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	RPL19	P84098	196 aa	Known RBP	11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	WDR73	Q6P4I2	378 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	CIART	Q8N365	385 aa	Predicted RBP	11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	ADTRP	Q96IZ2	230 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540		V9GYV3	84 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	CCDC168	Q8NDH2	2452 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	YLPM1	P49750	1951 aa	Known RBP	11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	CR1	P17927	2039 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	BUB1B-PAK6	H3BSN5	160 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540		M0R1X1	148 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	COMP	P49747	757 aa	Predicted RBP	11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	RAB31	Q13636	194 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	CCDC144NL	Q6NUI1	221 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	TEPP	Q6URK8	271 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	STPG3	Q8N7X2	389 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	VAMP8	Q9BV40	100 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	TMEM140	Q9NV12	185 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	DPM3	Q9P2X0	92 aa		11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	FOXA2	Q9Y261	457 aa	Predicted RBP	11.68	□□□□□ -0.54
NR1H3-231	ENST00000529540	C15orf61	A6NNL5	157 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	IGHV3-7	P01780	117 aa		11.67	□□□□□ -0.54
NR1H3-231	ENST00000529540	SAA2	P0DJI9	122 aa	Predicted RBP	11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms