RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GPR146Q96CH1 333 aa16.29■□□□□ 0.2
TRAPPC4-208ENST00000527680 HNRNPCP07910 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 SLC25A4P12235 298 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 OR10J1P30954 320 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 TCTAP57738 103 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 MRPS10P82664 201 aaKnown RBP16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 C2orf83Q53S99 150 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 PRSS54Q6PEW0 395 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 LHFPL5Q8TAF8 219 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 RNASEH2CQ8TDP1 164 aaKnown RBP16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 DCANP1Q8TF63 244 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 MIXL1Q9H2W2 232 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 KMT2AQ03164 3969 aa16.28■□□□□ 0.2
TRAPPC4-208ENST00000527680 IGHV4-28A0A0C4DH34 117 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 C11orf94C9JXX5 98 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 CTDSP2O14595 271 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 NXPH3O95157 252 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 GIG44P09565 113 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 MIFP14174 115 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 ETFRF1Q6IPR1 90 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 Q8NAQ8 132 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 SLC24A4Q8NFF2 622 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 CLEC5AQ9NY25 188 aa16.27■□□□□ 0.2
TRAPPC4-208ENST00000527680 IGLC1P0CG04 106 aa16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 RBMY1A1P0DJD3 496 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 RBMY1CP0DJD4 496 aa16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 YPEL3P61236 119 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 RBMY1FQ15415 496 aaKnown RBP16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 SURF2Q15527 256 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 AARDQ4LEZ3 155 aa16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 PSMG4Q5JS54 123 aa16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 NOXA1Q86UR1 476 aa16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 RAB40CQ96S21 281 aa16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 KCNIP3Q9Y2W7 256 aa16.26■□□□□ 0.19
TRAPPC4-208ENST00000527680 AKAIN1P0CW23 69 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 HLA-DMBP28068 263 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 IL18Q14116 193 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 C16orf54Q6UWD8 224 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 NPIPB3Q92617 1050 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 ACY3Q96HD9 319 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 HRH4Q9H3N8 390 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 GPR132Q9UNW8 380 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 U3KQE9 123 aa16.25■□□□□ 0.19
TRAPPC4-208ENST00000527680 CRYM-AS1A6NIL9 109 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 IFNA10P01566 189 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 IL4P05112 153 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 RD3LP0DJH9 198 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 SMIM18P0DKX4 95 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 C4BPBP20851 252 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 SNRPD3P62318 126 aaKnown RBP16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 PRR20EP86478 221 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 PRR20CP86479 221 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 PRR20DP86480 221 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 PRR20BP86481 221 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 PRR20AP86496 221 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 GPR141Q7Z602 305 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 OR4C16Q8NGL9 310 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 DIRAS2Q96HU8 199 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 PRRT1Q99946 306 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 CACFD1Q9UGQ2 172 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 TBC1D24Q9ULP9 559 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 APLNQ9ULZ1 77 aa16.24■□□□□ 0.19
TRAPPC4-208ENST00000527680 FRAS1Q86XX4 4008 aa16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 SULT1A3P0DMM9 295 aa16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 SULT1A4P0DMN0 295 aa16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 NPY1RP25929 384 aa16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 CLVS1Q8IUQ0 354 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 OR51S1Q8NGJ8 323 aa16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 SMIM4Q8WVI0 70 aa16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 GLMPQ8WWB7 406 aa16.23■□□□□ 0.19
TRAPPC4-208ENST00000527680 ZNF705EA8MWA4 302 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-208ENST00000527680 NUTF2P61970 127 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-208ENST00000527680 USF2Q15853 346 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC4-208ENST00000527680 TMEM56-RWDD3S4R434 201 aa16.22■□□□□ 0.19
TRAPPC4-208ENST00000527680 X6R8D5 127 aa16.22■□□□□ 0.19
TRAPPC4-208ENST00000527680 TRAV10A0A0B4J240 114 aa16.21■□□□□ 0.19
TRAPPC4-208ENST00000527680 SPCS2Q15005 226 aa16.21■□□□□ 0.19
TRAPPC4-208ENST00000527680 Q6ZTC4 211 aa16.21■□□□□ 0.19
TRAPPC4-208ENST00000527680 SCGB3A2Q96PL1 93 aa16.21■□□□□ 0.19
TRAPPC4-208ENST00000527680 ELOA3CA0A087WX78 387 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 GSTZ1O43708 216 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 TOMM40O96008 361 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 SIGLEC15Q6ZMC9 328 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 TMEM170AQ8WVE7 144 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 C1QTNF4Q9BXJ3 329 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 MRPS26Q9BYN8 205 aaKnown RBP16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 NRN1Q9NPD7 142 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 PRR13Q9NZ81 148 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 XCL2Q9UBD3 114 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 RABL2AQ9UBK7 228 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 SCP2D1Q9UJQ7 156 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 RABL2BQ9UNT1 228 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 U3KQ87 197 aa16.2■□□□□ 0.18
TRAPPC4-208ENST00000527680 FAM90A26D6RGX4 464 aa16.19■□□□□ 0.18
TRAPPC4-208ENST00000527680 CTDSPLO15194 276 aa16.19■□□□□ 0.18
TRAPPC4-208ENST00000527680 PSG1P11464 419 aa16.19■□□□□ 0.18
TRAPPC4-208ENST00000527680 AKR1C4P17516 323 aa16.19■□□□□ 0.18
TRAPPC4-208ENST00000527680 CSNK1G2-AS1Q8NCQ2 148 aa16.19■□□□□ 0.18
TRAPPC4-208ENST00000527680 OR51G1Q8NGK1 321 aa16.19■□□□□ 0.18
TRAPPC4-208ENST00000527680 IL22RA2Q969J5 263 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms