RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 A0A0A6YYH2 397 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 TRDV1A0A1B0GX56 115 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 A6NJ64 397 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF705EA8MWA4 302 aaPredicted RBP4.49□□□□□ -1.69
PABPC1-220ENST00000522658 GPR31O00270 319 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 ATG12O94817 140 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 RBMY1A1P0DJD3 496 aaKnown RBP4.49□□□□□ -1.69
PABPC1-220ENST00000522658 RBMY1CP0DJD4 496 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 C4BPBP20851 252 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 P2RY1P47900 373 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 AP2S1P53680 142 aaPredicted RBP4.49□□□□□ -1.69
PABPC1-220ENST00000522658 SCAND1P57086 179 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 BRWD1-AS2P59051 145 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 RBMY1FQ15415 496 aaKnown RBP4.49□□□□□ -1.69
PABPC1-220ENST00000522658 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 TOMM20LQ6UXN7 152 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 MAPKAPK5-AS1Q8N8E1 139 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 OR6F1Q8NGZ6 308 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 FCAMRQ8WWV6 532 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 FAM210BQ96KR6 192 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 C7orf50Q9BRJ6 194 aaKnown RBP4.49□□□□□ -1.69
PABPC1-220ENST00000522658 VSIRQ9H7M9 311 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 XCL2Q9UBD3 114 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 CELA1Q9UNI1 258 aa4.49□□□□□ -1.69
PABPC1-220ENST00000522658 MEIS3P1A6NDR6 274 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 I3L2K1 104 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 RTL8CO15255 209 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 SSX5O60225 188 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 PGLYRP1O75594 196 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-220ENST00000522658 HNRNPCP07910 306 aaKnown RBP eCLIP4.48□□□□□ -1.69
PABPC1-220ENST00000522658 PTHLHP12272 177 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 NUP62P37198 522 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-220ENST00000522658 HSPA13P48723 471 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 AQP4P55087 323 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 PRCDQ00LT1 54 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 MXD1Q05195 221 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 C12orf74Q32Q52 190 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 PHLDA2Q53GA4 152 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 IDNKQ5T6J7 187 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 FAM90A2PQ658T7 463 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 GSG1LQ6UXU4 331 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 FAM24BQ8N5W8 94 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF114Q8NC26 417 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 COQ8AQ8NI60 647 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 FCGR1BQ92637 280 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 CNBD2Q96M20 576 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 RFNGQ9Y644 331 aa4.48□□□□□ -1.69
PABPC1-220ENST00000522658 PCLOQ9Y6V0 5065 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 TRGV11A0A075B6L2 103 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 TRAV30A0A087WSZ9 112 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 LOC100506127A0A0U1RQW1 187 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 K7EQG2 157 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 HBE1P02100 147 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 PMP2P02689 132 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 APOHP02749 345 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-220ENST00000522658 PGAM2P15259 253 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 ID1P41134 155 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 HSPE1P61604 102 aaKnown RBP4.47□□□□□ -1.69
PABPC1-220ENST00000522658 DAD1P61803 113 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 RNF212Q495C1 297 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 SPINK9Q5DT21 86 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 TMEM69Q5SWH9 247 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 C15orf53Q8NAA6 179 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 MRGPRFQ96AM1 343 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 NIPSNAP3BQ9BS92 247 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 DUSP21Q9H596 190 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 TXNL4BQ9NX01 149 aaKnown RBP4.47□□□□□ -1.69
PABPC1-220ENST00000522658 GOLT1BQ9Y3E0 138 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 DNAH10Q8IVF4 4471 aa4.47□□□□□ -1.69
PABPC1-220ENST00000522658 SMIM9A6NGZ8 99 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 CLN5O75503 358 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 CDK2AP2O75956 126 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 IGKV3-20P01619 116 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 GNRHRP30968 328 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 SDC2P34741 201 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 RFX2P48378 723 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 FAM3BP58499 235 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-220ENST00000522658 CLINT1Q14677 625 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 TRIM16LQ309B1 348 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 SIGLEC15Q6ZMC9 328 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 TBC1D26Q86UD7 250 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 SPARTQ8N0X7 666 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 CADM3Q8N126 398 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 OR4B1Q8NGF8 309 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 OR1S2Q8NGQ3 325 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 Q8WTZ3 238 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 PPP1R14BQ96C90 147 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 RRNAD1Q96FB5 475 aaKnown RBP4.46□□□□□ -1.7
PABPC1-220ENST00000522658 S100A16Q96FQ6 103 aaKnown RBP4.46□□□□□ -1.7
PABPC1-220ENST00000522658 RAB40CQ96S21 281 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 FXYD6Q9H0Q3 95 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 AUNIPQ9H7T9 357 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 FAM212BQ9NTI7 297 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-220ENST00000522658 PTTG2Q9NZH5 202 aa4.46□□□□□ -1.7
PABPC1-220ENST00000522658 A0A1B0GU03 582 aa4.45□□□□□ -1.7
PABPC1-220ENST00000522658 LOC102723971A0A1B0GUV8 181 aa4.45□□□□□ -1.7
PABPC1-220ENST00000522658 SMIM31A0A1B0GVY4 71 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms