RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 PGFP49763 221 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 NPC2P61916 151 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 CCL20P78556 96 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 C1orf61Q13536 156 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 ZNF141Q15928 474 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 ZNF718Q3SXZ3 478 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 SPRNQ5BIV9 151 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 FAM27D1Q5T7N8 215 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 FRG2Q64ET8 278 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 KCTD18Q6PI47 426 aaPredicted RBP3.29□□□□□ -1.88
GYPA-208ENST00000512064 LHFPL1Q86WI0 220 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 CIARTQ8N365 385 aaPredicted RBP3.29□□□□□ -1.88
GYPA-208ENST00000512064 TMEM252Q8N6L7 170 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 MORN4Q8NDC4 146 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 OSR1Q8TAX0 266 aaPredicted RBP3.29□□□□□ -1.88
GYPA-208ENST00000512064 WWC2-AS2Q96NR7 200 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 FRG2BQ96QU4 278 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 TRGV9Q99603 122 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 HDHD3Q9BSH5 251 aaPredicted RBP3.29□□□□□ -1.88
GYPA-208ENST00000512064 SRXN1Q9BYN0 137 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 RNASE7Q9H1E1 156 aaKnown RBP3.29□□□□□ -1.88
GYPA-208ENST00000512064 PELI2Q9HAT8 420 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 RETNQ9HD89 108 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 C19orf25Q9UFG5 118 aaPredicted RBP3.29□□□□□ -1.88
GYPA-208ENST00000512064 STRCP1A6NGW2 1772 aa3.29□□□□□ -1.88
GYPA-208ENST00000512064 SIPA1L3O60292 1781 aaPredicted RBP3.28□□□□□ -1.88
GYPA-208ENST00000512064 BCORQ6W2J9 1755 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 KIDINS220Q9ULH0 1771 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 EVPLQ92817 2033 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 LOC107986453A0A1B0GWG9 222 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 C11orf94C9JXX5 98 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 NPIPB11E5RHQ5 1161 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 H0YIG0 161 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 NDUFB3O43676 98 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 NDUFC1O43677 76 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 NPYP01303 97 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 ASAH2BP0C7U1 165 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 EDN2P20800 178 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 NBL1P41271 181 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 ZNF136P52737 540 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 FOXA3P55318 350 aaPredicted RBP3.28□□□□□ -1.88
GYPA-208ENST00000512064 HILS1P60008 231 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 HERV-K104P61576 105 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 POLR2LP62875 67 aaKnown RBP3.28□□□□□ -1.88
GYPA-208ENST00000512064 SLC38A11Q08AI6 406 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 ARL16Q0P5N6 197 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
GYPA-208ENST00000512064 ARFRP1Q13795 201 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 DIAPH2-AS1Q14236 149 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 FAM78AQ5JUQ0 283 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 C22orf39Q6P5X5 142 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 LINC00643Q86TS7 51 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 SFTPA1Q8IWL2 248 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 SLC25A45Q8N413 288 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 SLC22A24Q8N4F4 322 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 LINC01465Q8N7H1 131 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 ZNF441Q8N8Z8 693 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 KLHDC9Q8NEP7 349 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 OR5C1Q8NGR4 320 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 DDB2Q92466 427 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 IFI27L1Q96BM0 104 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 BORCS8Q96FH0 119 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 DEFB118Q96PH6 123 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 FOXC2Q99958 501 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 PRRG4Q9BZD6 226 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 PILRAQ9UKJ1 303 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 TP53TG3Q9ULZ0 132 aa3.28□□□□□ -1.88
GYPA-208ENST00000512064 COL11A2P13942 1736 aaPredicted RBP3.27□□□□□ -1.89
GYPA-208ENST00000512064 TRAV26-2A0A0B4J265 109 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 TRBV7-6A0A0J9YX20 115 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 MYMXA0A1B0GTQ4 84 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 LILRA5A6NI73 299 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 LINC01549A6NIU2 74 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 KNCNA6PVL3 124 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 F2Z2F3 143 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 M0QZQ0 153 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 FFAR1O14842 300 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 P01737 135 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 IGKCP01834 107 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 CD55P08174 381 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 RFPL3SP0C7P2 107 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 EGR2P11161 476 aaPredicted RBP3.27□□□□□ -1.89
GYPA-208ENST00000512064 HMGA1P17096 107 aaKnown RBP3.27□□□□□ -1.89
GYPA-208ENST00000512064 ZFP36P26651 326 aaKnown RBP3.27□□□□□ -1.89
GYPA-208ENST00000512064 AQP1P29972 269 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 NMUP48645 174 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 LIM2P55344 173 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 QRFPP83859 136 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 POU3F1Q03052 451 aaPredicted RBP3.27□□□□□ -1.89
GYPA-208ENST00000512064 DPTQ07507 201 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 EBI3Q14213 229 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 FKBP1CQ5VVH2 108 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 LCN10Q6JVE6 187 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 HRCT1Q6UXD1 115 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 SCGB1D4Q6XE38 83 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 DGAT2L6Q6ZPD8 337 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 C2orf91Q6ZV80 131 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 SH2D6Q7Z4S9 175 aa3.27□□□□□ -1.89
GYPA-208ENST00000512064 FAM19A1Q7Z5A9 133 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms