RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TXNDC17Q9BRA2 123 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 SEC11CQ9BY50 192 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 MRPL36Q9P0J6 103 aaKnown RBP11.94□□□□□ -0.5
SCLT1-209ENST00000511426 FUT9Q9Y231 359 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 ARL2-SNX15V9GYD0 113 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 PSMB11A5LHX3 300 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 FAM223BA6NKX1 122 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 IGHV4-59P01825 116 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 BCL2P10415 239 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 YPEL3P61236 119 aaPredicted RBP11.94□□□□□ -0.5
SCLT1-209ENST00000511426 PQLC2Q6ZP29 291 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 C19orf35Q6ZS72 473 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 SUN5Q8TC36 379 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 DNAJC4Q9NNZ3 241 aa11.94□□□□□ -0.5
SCLT1-209ENST00000511426 SOX21Q9Y651 276 aaPredicted RBP11.94□□□□□ -0.5
SCLT1-209ENST00000511426 ABCA12Q86UK0 2595 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 SMAD7O15105 426 aaKnown RBP11.93□□□□□ -0.5
SCLT1-209ENST00000511426 C10orf91Q5T1B1 145 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 FAM78BQ5VT40 261 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 SSX7Q7RTT5 188 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 TECRQ9NZ01 308 aaKnown RBP11.93□□□□□ -0.5
SCLT1-209ENST00000511426 VAX2Q9UIW0 290 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 FBXL7Q9UJT9 491 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 POLQO75417 2590 aa11.93□□□□□ -0.5
SCLT1-209ENST00000511426 LOC102723971A0A1B0GUV8 181 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 MDFIC2A0A1B0GVS7 189 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 GNG7O60262 68 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 COX7A2P2O60397 106 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 CCL20P78556 96 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 ZNF90Q03938 601 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 GCSAMLQ5JQS6 135 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 STXBP6Q8NFX7 210 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 SLC35B3Q9H1N7 401 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 RNF24Q9Y225 148 aa11.92□□□□□ -0.5
SCLT1-209ENST00000511426 CARHSP1Q9Y2V2 147 aaKnown RBP11.92□□□□□ -0.5
SCLT1-209ENST00000511426 CREBBPQ92793 2442 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 CSMD2Q7Z408 3487 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 ASH1LQ9NR48 2969 aaKnown RBP11.91□□□□□ -0.5
SCLT1-209ENST00000511426 TRBV7-1A0A0A6YYK4 115 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 OR2J3O76001 311 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 TOMM40O96008 361 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 S100A7P31151 101 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 KRTAP1-1Q07627 177 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 FAM209BQ5JX69 171 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 C10orf113Q5VZT2 155 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 SPNS3Q6ZMD2 512 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 LINC00052Q96N35 136 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 NPFFR1Q9GZQ6 430 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 SEPSECSQ9HD40 501 aaKnown RBP11.91□□□□□ -0.5
SCLT1-209ENST00000511426 TMEM167BQ9NRX6 74 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 GNG13Q9P2W3 67 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 NAV3Q8IVL0 2385 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 PLXNB1O43157 2135 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 TMEM89A2RUT3 159 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 IGKV1-17P01599 117 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 IGHV3-48P01763 117 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 PPIFP30405 207 aaKnown RBP11.91□□□□□ -0.5
SCLT1-209ENST00000511426 SRP14P37108 136 aaKnown RBP11.91□□□□□ -0.5
SCLT1-209ENST00000511426 FGF8P55075 233 aaPredicted RBP11.91□□□□□ -0.5
SCLT1-209ENST00000511426 RHOGP84095 191 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 SRSF3P84103 164 aaKnown RBP11.91□□□□□ -0.5
SCLT1-209ENST00000511426 C9orf152Q5JTZ5 239 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 OR51G1Q8NGK1 321 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 EEF1AKMT3Q96AZ1 226 aa11.91□□□□□ -0.5
SCLT1-209ENST00000511426 A0A1B0GV50 99 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 HYPMO75409 117 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 NDUFB8O95169 186 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 OR2C1O95371 312 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 SFTA3P0C7M3 94 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 RD3LP0DJH9 198 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 ZNF502Q8TBZ5 544 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 TMEM190Q8WZ59 177 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
SCLT1-209ENST00000511426 CENPEQ02224 2701 aa11.9□□□□□ -0.51
SCLT1-209ENST00000511426 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 F8W036 122 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 G3V318 75 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 ARL14EPLP0DKL9 152 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 PSG1P11464 419 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 GATA2P23769 480 aaPredicted RBP11.89□□□□□ -0.51
SCLT1-209ENST00000511426 MEF2BQ02080 365 aaPredicted RBP11.89□□□□□ -0.51
SCLT1-209ENST00000511426 ICAM4Q14773 271 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 HAGHQ16775 308 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 Q56UQ5 140 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 CCDC28AQ8IWP9 274 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 SVBPQ8N300 66 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 Q8WTZ3 238 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SCLT1-209ENST00000511426 LINC01548A6NM66 108 aa11.88□□□□□ -0.51
SCLT1-209ENST00000511426 TMEM250H0YL14 139 aa11.88□□□□□ -0.51
SCLT1-209ENST00000511426 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
SCLT1-209ENST00000511426 HOXA3O43365 443 aaPredicted RBP11.88□□□□□ -0.51
SCLT1-209ENST00000511426 BLCAPP62952 87 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms