RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 TMBIM6P55061 237 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 LEMD1Q68G75 181 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 PVRIGQ6DKI7 326 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 STHQ8IWL8 128 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 LILRB2Q8N423 598 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 OR51S1Q8NGJ8 323 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 OR4C16Q8NGL9 310 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 OR1S2Q8NGQ3 325 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 OR11H2Q8NH07 326 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 RNASEH2CQ8TDP1 164 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 GPR146Q96CH1 333 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 ZNF414Q96IQ9 312 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 CCDC59Q9P031 241 aaKnown RBP7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 GPR132Q9UNW8 380 aa7.43□□□□□ -1.22
UBE2D3-227ENST00000508818 CSMD3Q7Z407 3707 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 HELTA6NFD8 242 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 FABP12A6NFH5 140 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 NXPH3O95157 252 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 IFNA10P01566 189 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 IFNA4P05014 189 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 ANXA3P12429 323 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 AKR1C4P17516 323 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 CRYBB3P26998 211 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 OR10J1P30954 320 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 P2RY1P47900 373 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 RND2P52198 227 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 AP2S1P53680 142 aaPredicted RBP7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 EWSR1Q01844 656 aaKnown RBP eCLIP7.42□□□□□ -1.225e-7■■■■■ 34.3
UBE2D3-227ENST00000508818 TMEM187Q14656 261 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 C2orf83Q53S99 150 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 SLC24A4Q8NFF2 622 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 LHFPL5Q8TAF8 219 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 BCL7BQ9BQE9 202 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 MFFQ9GZY8 342 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 MRPL36Q9P0J6 103 aaKnown RBP7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 TMEM56-RWDD3S4R434 201 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 STARD9Q9P2P6 4700 aa7.42□□□□□ -1.22
UBE2D3-227ENST00000508818 PIGBOS1A0A0B4J2F0 54 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 ANKRD20A5PA0PJZ0 165 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 GSTZ1O43708 216 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 IGKV1-17P01599 117 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 NPY1RP25929 384 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 FAUP35544 74 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 SRPXP78539 464 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 DHRS2Q13268 280 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 RBMS2Q15434 407 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 BSXQ3C1V8 233 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 AARDQ4LEZ3 155 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 PRSS54Q6PEW0 395 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 CENPSQ8N2Z9 138 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 MCFD2Q8NI22 146 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 DYNC2LI1Q8TCX1 351 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 PHLDA1Q8WV24 401 aaPredicted RBP7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 IL22RA2Q969J5 263 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 ACY3Q96HD9 319 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 FBXL17Q9UF56 701 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
UBE2D3-227ENST00000508818 K7EQG2 157 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 HNRNPCP07910 306 aaKnown RBP eCLIP7.4□□□□□ -1.224e-11■■□□□ 14.1
UBE2D3-227ENST00000508818 ZNF688P0C7X2 276 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 RD3LP0DJH9 198 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 CCR6P51684 374 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 YPEL3P61236 119 aaPredicted RBP7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 SMCO1Q147U7 214 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 TMEM41BQ5BJD5 291 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 LGI3Q8N145 548 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 FAM24BQ8N5W8 94 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 OR1S1Q8NH92 325 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 NPIPB3Q92617 1050 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 PFDN2Q9UHV9 154 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 U3KQ87 197 aa7.4□□□□□ -1.22
UBE2D3-227ENST00000508818 A0A0B4J2A0 478 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 A6NJY4 79 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 IL4P05112 153 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 IGLC1P0CG04 106 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 SPP1P10451 314 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 TNFSF8P32971 234 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 AP3S2P59780 193 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 NANOS2P60321 138 aaKnown RBP7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 KLF9Q13886 244 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 PYDC2Q56P42 97 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 ACTL10Q5JWF8 245 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 MORN3Q6PF18 240 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 DTD1Q8TEA8 209 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 PRR13Q9NZ81 148 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 SHPKQ9UHJ6 478 aa7.39□□□□□ -1.23
UBE2D3-227ENST00000508818 CCDC160A6NGH7 325 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 KNCNA6PVL3 124 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 H3BMQ9 156 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 DEFB4AO15263 64 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 FABP1P07148 127 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 S100A5P33763 92 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 ATP5IP56385 69 aaPredicted RBP7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 SNRPD3P62318 126 aaKnown RBP7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 NMSQ5H8A3 153 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 PSMG4Q5JS54 123 aa7.38□□□□□ -1.23
UBE2D3-227ENST00000508818 C16orf54Q6UWD8 224 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms