RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CXorf65A6NEN9 183 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 CEBPZOSA8MTT3 80 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 CORTO00230 105 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 B3GALNT1O75752 331 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 JTBO76095 146 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 AKR1C4P17516 323 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 NPPCP23582 126 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 TNFSF8P32971 234 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 CMC4P56277 68 aaPredicted RBP7.07□□□□□ -1.28
MSH5-218ENST00000494646 DEFB131AP59861 70 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 RBMS2Q15434 407 aaKnown RBP7.07□□□□□ -1.28
MSH5-218ENST00000494646 FAM219AQ8IW50 185 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 KIR2DL5AQ8N109 375 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 FAM24BQ8N5W8 94 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 OR4X1Q8NH49 305 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 OR52E5Q8NH55 327 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 KIR2DL5BQ8NHK3 375 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 RBPMSQ93062 196 aaKnown RBP7.07□□□□□ -1.28
MSH5-218ENST00000494646 PRRT1Q99946 306 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 CSTL1Q9H114 145 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 MCUBQ9NWR8 336 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 TP53TG1Q9Y2A0 90 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 KCNIP3Q9Y2W7 256 aa7.07□□□□□ -1.28
MSH5-218ENST00000494646 MPTX1A8MV57 137 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 H3BMQ9 156 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 HTR2BP41595 481 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 RPL5P46777 297 aaKnown RBP7.06□□□□□ -1.28
MSH5-218ENST00000494646 TMEM187Q14656 261 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 SURF2Q15527 256 aaPredicted RBP7.06□□□□□ -1.28
MSH5-218ENST00000494646 BSXQ3C1V8 233 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 LYZL2Q7Z4W2 148 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 MCFD2Q8NI22 146 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 SOSTQ9BQB4 213 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 SLIRPQ9GZT3 109 aaKnown RBP7.06□□□□□ -1.28
MSH5-218ENST00000494646 CCDC59Q9P031 241 aaKnown RBP7.06□□□□□ -1.28
MSH5-218ENST00000494646 RSL24D1Q9UHA3 163 aaKnown RBP7.06□□□□□ -1.28
MSH5-218ENST00000494646 RABAC1Q9UI14 185 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 SCP2D1Q9UJQ7 156 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 TMEM56-RWDD3S4R434 201 aa7.06□□□□□ -1.28
MSH5-218ENST00000494646 DNAH17Q9UFH2 4485 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 A0A1W2PS18 150 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 GSTZ1O43708 216 aaPredicted RBP7.05□□□□□ -1.28
MSH5-218ENST00000494646 NOL3O60936 208 aaKnown RBP7.05□□□□□ -1.28
MSH5-218ENST00000494646 IGKV1-17P01599 117 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 SULT1A3P0DMM9 295 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 SULT1A4P0DMN0 295 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 TNFRSF9Q07011 255 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 C2orf83Q53S99 150 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 PRSS54Q6PEW0 395 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 STXBP6Q8NFX7 210 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 Q8WTZ3 238 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 TMEM170AQ8WVE7 144 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 SCGB3A2Q96PL1 93 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 METTL26Q96S19 204 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 RARRES2Q99969 163 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 BCL7BQ9BQE9 202 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 TMEM231Q9H6L2 316 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 RABL2AQ9UBK7 228 aaPredicted RBP7.05□□□□□ -1.28
MSH5-218ENST00000494646 RABL2BQ9UNT1 228 aa7.05□□□□□ -1.28
MSH5-218ENST00000494646 TRAV30A0A087WSZ9 112 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 RPS10-NUDT3A0A1W2PQS6 291 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 CCDC160A6NGH7 325 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 DEFB4AO15263 64 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 LY6G6CO95867 125 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 IFNA10P01566 189 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 CD5P06127 495 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 CRYBB3P26998 211 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 P2RY1P47900 373 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 RND2P52198 227 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 SUPT4H1P63272 117 aaKnown RBP7.04□□□□□ -1.28
MSH5-218ENST00000494646 AARDQ4LEZ3 155 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 PYDC2Q56P42 97 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 SLC24A4Q8NFF2 622 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 OR11H2Q8NH07 326 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 NPIPB3Q92617 1050 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 ACY3Q96HD9 319 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 RBKSQ9H477 322 aa7.04□□□□□ -1.28
MSH5-218ENST00000494646 KNCNA6PVL3 124 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 K7EQG2 157 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 SCGB2A1O75556 95 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 CA1P00915 261 aaPredicted RBP7.03□□□□□ -1.28
MSH5-218ENST00000494646 ZNF688P0C7X2 276 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 IGLC1P0CG04 106 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 NPY1RP25929 384 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 OR10J1P30954 320 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 CEMP1Q6PRD7 247 aaPredicted RBP7.03□□□□□ -1.28
MSH5-218ENST00000494646 TMED4Q7Z7H5 227 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 STHQ8IWL8 128 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 OR1S2Q8NGQ3 325 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 RNASEH2CQ8TDP1 164 aaKnown RBP7.03□□□□□ -1.28
MSH5-218ENST00000494646 IL22RA2Q969J5 263 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 HECTD4Q9Y4D8 3996 aa7.03□□□□□ -1.28
MSH5-218ENST00000494646 A0A0B4J2A0 478 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 IL4P05112 153 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 SLC25A4P12235 298 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 ANXA3P12429 323 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 CCR6P51684 374 aa7.02□□□□□ -1.29
MSH5-218ENST00000494646 NANOS2P60321 138 aaKnown RBP7.02□□□□□ -1.29
MSH5-218ENST00000494646 DHRS2Q13268 280 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms