RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 DCANP1Q8TF63 244 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 SMIM4Q8WVI0 70 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
PTPRU-208ENST00000493601 MIXL1Q9H2W2 232 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 HRH4Q9H3N8 390 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 CACNG5Q9UF02 275 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 CACFD1Q9UGQ2 172 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 CRYM-AS1A6NIL9 109 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 CEBPZOSA8MTT3 80 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 C11orf94C9JXX5 98 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 IGLC1P0CG04 106 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 MIFP14174 115 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 OR10J1P30954 320 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 YPEL3P61236 119 aaPredicted RBP12.1□□□□□ -0.47
PTPRU-208ENST00000493601 TMEM268Q5VZI3 342 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 PRSS54Q6PEW0 395 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 SELENOHQ8IZQ5 122 aaKnown RBP12.1□□□□□ -0.47
PTPRU-208ENST00000493601 Q8WTZ3 238 aa12.1□□□□□ -0.47
PTPRU-208ENST00000493601 AGRNO00468 2067 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 KNCNA6PVL3 124 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 HNRNPCP07910 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTPRU-208ENST00000493601 GIG44P09565 113 aaPredicted RBP12.09□□□□□ -0.47
PTPRU-208ENST00000493601 AKAIN1P0CW23 69 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 AP2S1P53680 142 aaPredicted RBP12.09□□□□□ -0.47
PTPRU-208ENST00000493601 DHRS2Q13268 280 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 ACTL10Q5JWF8 245 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 ETFRF1Q6IPR1 90 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 NOXA1Q86UR1 476 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 OR4C16Q8NGL9 310 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 GLMPQ8WWB7 406 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 PRRT1Q99946 306 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 RABL2AQ9UBK7 228 aaPredicted RBP12.09□□□□□ -0.47
PTPRU-208ENST00000493601 RABL2BQ9UNT1 228 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 U3KQE9 123 aa12.09□□□□□ -0.47
PTPRU-208ENST00000493601 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
PTPRU-208ENST00000493601 C4BPBP20851 252 aa12.08□□□□□ -0.48
PTPRU-208ENST00000493601 C16orf54Q6UWD8 224 aa12.08□□□□□ -0.48
PTPRU-208ENST00000493601 GPR141Q7Z602 305 aa12.08□□□□□ -0.48
PTPRU-208ENST00000493601 GPR146Q96CH1 333 aa12.08□□□□□ -0.48
PTPRU-208ENST00000493601 MRPS26Q9BYN8 205 aaKnown RBP12.08□□□□□ -0.48
PTPRU-208ENST00000493601 TMEM56-RWDD3S4R434 201 aa12.08□□□□□ -0.48
PTPRU-208ENST00000493601 ZNF705EA8MWA4 302 aaPredicted RBP12.07□□□□□ -0.48
PTPRU-208ENST00000493601 CTDSP2O14595 271 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 CTDSPLO15194 276 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 GSTZ1O43708 216 aaPredicted RBP12.07□□□□□ -0.48
PTPRU-208ENST00000493601 IL4P05112 153 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 SULT1A3P0DMM9 295 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 SULT1A4P0DMN0 295 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 NPY1RP25929 384 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 SNRPD3P62318 126 aaKnown RBP12.07□□□□□ -0.48
PTPRU-208ENST00000493601 IL18Q14116 193 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 CENPSQ8N2Z9 138 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 IL22RA2Q969J5 263 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 GPR132Q9UNW8 380 aa12.07□□□□□ -0.48
PTPRU-208ENST00000493601 IGLL5B9A064 214 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 NXPH3O95157 252 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 RBMY1A1P0DJD3 496 aaKnown RBP12.06□□□□□ -0.48
PTPRU-208ENST00000493601 RBMY1CP0DJD4 496 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 SPCS2Q15005 226 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 RBMY1FQ15415 496 aaKnown RBP12.06□□□□□ -0.48
PTPRU-208ENST00000493601 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
PTPRU-208ENST00000493601 NMSQ5H8A3 153 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 OR51S1Q8NGJ8 323 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 DIRAS2Q96HU8 199 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 TBC1D24Q9ULP9 559 aa12.06□□□□□ -0.48
PTPRU-208ENST00000493601 TOMM40O96008 361 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 RD3LP0DJH9 198 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 CLVS1Q8IUQ0 354 aaPredicted RBP12.05□□□□□ -0.48
PTPRU-208ENST00000493601 NPIPB3Q92617 1050 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 SCGB3A2Q96PL1 93 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 RAB40CQ96S21 281 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 NRN1Q9NPD7 142 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 CLEC5AQ9NY25 188 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 CCDC59Q9P031 241 aaKnown RBP12.05□□□□□ -0.48
PTPRU-208ENST00000493601 SCP2D1Q9UJQ7 156 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 KCNIP3Q9Y2W7 256 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 X6R8D5 127 aa12.05□□□□□ -0.48
PTPRU-208ENST00000493601 ANKRD20A5PA0PJZ0 165 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 FAM90A26D6RGX4 464 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 IFNA10P01566 189 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 HLA-DMBP28068 263 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 NUP62P37198 522 aaPredicted RBP12.04□□□□□ -0.48
PTPRU-208ENST00000493601 ALDH3B2P48448 385 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 NUTF2P61970 127 aaKnown RBP12.04□□□□□ -0.48
PTPRU-208ENST00000493601 SIGLEC15Q6ZMC9 328 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 RAB2BQ8WUD1 216 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 C1QTNF4Q9BXJ3 329 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 SEPSECSQ9HD40 501 aaKnown RBP12.04□□□□□ -0.48
PTPRU-208ENST00000493601 U3KQ87 197 aa12.04□□□□□ -0.48
PTPRU-208ENST00000493601 TRAV10A0A0B4J240 114 aa12.03□□□□□ -0.48
PTPRU-208ENST00000493601 BUB3O43684 328 aa12.03□□□□□ -0.48
PTPRU-208ENST00000493601 CCR6P51684 374 aa12.03□□□□□ -0.48
PTPRU-208ENST00000493601 PRR20EP86478 221 aa12.03□□□□□ -0.48
PTPRU-208ENST00000493601 PRR20CP86479 221 aa12.03□□□□□ -0.48
PTPRU-208ENST00000493601 PRR20DP86480 221 aa12.03□□□□□ -0.48
PTPRU-208ENST00000493601 PRR20BP86481 221 aa12.03□□□□□ -0.48
PTPRU-208ENST00000493601 PRR20AP86496 221 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms