RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 THAP8Q8NA92 274 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 TMEM116Q8NCL8 245 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 NPIPB3Q92617 1050 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 JMJD8Q96S16 334 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 TRGV9Q99603 122 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 NKX6-2Q9C056 277 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-210ENST00000490808 WNT10AQ9GZT5 417 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 TECRQ9NZ01 308 aaKnown RBP8.15□□□□□ -1.1
HDAC3-210ENST00000490808 RNF24Q9Y225 148 aa8.15□□□□□ -1.1
HDAC3-210ENST00000490808 FCN1O00602 326 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 CLN5O75503 358 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 REG1AP05451 166 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 CRYGCP07315 174 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 AREGP15514 252 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 CTRB1P17538 263 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 NPBWR1P48145 328 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 CX3CL1P78423 397 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 CCL20P78556 96 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 SRSF3P84103 164 aaKnown RBP8.14□□□□□ -1.11
HDAC3-210ENST00000490808 ZNF726P1Q15940 193 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 FAM74A3Q4VXF1 159 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 CTRB2Q6GPI1 263 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 PQLC2Q6ZP29 291 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 C16orf82Q7Z2V1 217 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 DYNAPQ8N1N2 210 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 TTC9CQ8N5M4 171 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 RXFP4Q8TDU9 374 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 SLC25A33Q9BSK2 321 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 DNAJC4Q9NNZ3 241 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 FUT9Q9Y231 359 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 MOB4Q9Y3A3 225 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 TNCP24821 2201 aa8.14□□□□□ -1.11
HDAC3-210ENST00000490808 F6UZH7 168 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 TMEM250H0YL14 139 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 PDE6DO43924 150 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 COX7A2P2O60397 106 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 SRP19P09132 144 aaKnown RBP8.13□□□□□ -1.11
HDAC3-210ENST00000490808 STAG3L2P0CL84 134 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 STAG3L3P0CL85 134 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 CD24P25063 80 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 RND2P52198 227 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 FGF8P55075 233 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-210ENST00000490808 MEF2BQ02080 365 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-210ENST00000490808 ICAM4Q14773 271 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 Q8N9W7 124 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 STXBP6Q8NFX7 210 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 OR4X1Q8NH49 305 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 OR2T6Q8NHC8 308 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 ZNF418Q8TF45 676 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-210ENST00000490808 RBM14Q96PK6 669 aaKnown RBP8.13□□□□□ -1.11
HDAC3-210ENST00000490808 RARRES2Q99969 163 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 NIPSNAP3BQ9BS92 247 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 GAR1Q9NY12 217 aaKnown RBP8.13□□□□□ -1.11
HDAC3-210ENST00000490808 PRELID1Q9Y255 219 aa8.13□□□□□ -1.11
HDAC3-210ENST00000490808 B4DEV8 164 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 YIF1AO95070 293 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 LINC00869P0C866 280 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 MFAP4P55083 255 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 PNRC1Q12796 327 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-210ENST00000490808 C10orf113Q5VZT2 155 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 SGMS2Q8NHU3 365 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 UHRF2Q96PU4 802 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 TXN2Q99757 166 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 SSX3Q99909 188 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 SCRT1Q9BWW7 348 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 FNDC4Q9H6D8 234 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-210ENST00000490808 TNFRSF19Q9NS68 423 aa8.12□□□□□ -1.11
HDAC3-210ENST00000490808 M0R036 132 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 OR5G3P0C626 314 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 C8orf88P0DMB2 117 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 CEBPGP53567 150 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 RHEBQ15382 184 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 MLANAQ16655 118 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 UNQ5815/PRO19632Q6UWF5 114 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 TMEM86BQ8N661 226 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 CLRN3Q8NCR9 226 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 TMEM190Q8WZ59 177 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 TMEM158Q8WZ71 300 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 TVP23CQ96ET8 276 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 AJUBAQ96IF1 538 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-210ENST00000490808 PRDM13Q9H4Q3 707 aa8.11□□□□□ -1.11
HDAC3-210ENST00000490808 IGHV7-81A0A0B4J1V7 117 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 A0A0U1RQK1 487 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 I3L2K1 104 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 TCF21O43680 179 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 GNG7O60262 68 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 HYPMO75409 117 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 AVPP01185 164 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 ARL14EPLP0DKL9 152 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 APELAP0DMC3 54 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 GCHFRP30047 84 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 PLP1P60201 277 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 AKIRIN2Q53H80 203 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 SSX7Q7RTT5 188 aa8.1□□□□□ -1.11
HDAC3-210ENST00000490808 OR4F5Q8NH21 305 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms