RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 C2CD4CQ8TF44 421 aa8.34□□□□□ -1.07
SCFD1-206ENST00000484733 GPR146Q96CH1 333 aa8.34□□□□□ -1.07
SCFD1-206ENST00000484733 SEPSECSQ9HD40 501 aaKnown RBP8.34□□□□□ -1.07
SCFD1-206ENST00000484733 TMEM56-RWDD3S4R434 201 aa8.34□□□□□ -1.07
SCFD1-206ENST00000484733 HELTA6NFD8 242 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 CRYM-AS1A6NIL9 109 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 ZNF705EA8MWA4 302 aaPredicted RBP8.34□□□□□ -1.08
SCFD1-206ENST00000484733 C11orf94C9JXX5 98 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 IGLC1P0CG04 106 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 MIFP14174 115 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 C16orf54Q6UWD8 224 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 NOXA1Q86UR1 476 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 RPP25LQ8N5L8 163 aaKnown RBP8.34□□□□□ -1.08
SCFD1-206ENST00000484733 STXBP6Q8NFX7 210 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 Q8WTZ3 238 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 IL22RA2Q969J5 263 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 FBXL17Q9UF56 701 aa8.34□□□□□ -1.08
SCFD1-206ENST00000484733 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
SCFD1-206ENST00000484733 HNRNPCP07910 306 aaKnown RBP eCLIP8.33□□□□□ -1.088e-7■□□□□ 9.9
SCFD1-206ENST00000484733 AP2S1P53680 142 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-206ENST00000484733 ETFRF1Q6IPR1 90 aa8.33□□□□□ -1.08
SCFD1-206ENST00000484733 PRSS54Q6PEW0 395 aa8.33□□□□□ -1.08
SCFD1-206ENST00000484733 SMIM4Q8WVI0 70 aa8.33□□□□□ -1.08
SCFD1-206ENST00000484733 GLMPQ8WWB7 406 aa8.33□□□□□ -1.08
SCFD1-206ENST00000484733 HEYLQ9NQ87 328 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-206ENST00000484733 AKAIN1P0CW23 69 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 ALDH3B2P48448 385 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 CACNG5Q9UF02 275 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 RBMY1A1P0DJD3 496 aaKnown RBP8.32□□□□□ -1.08
SCFD1-206ENST00000484733 RBMY1CP0DJD4 496 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 OR10J1P30954 320 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 DHRS2Q13268 280 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 RBMY1FQ15415 496 aaKnown RBP8.32□□□□□ -1.08
SCFD1-206ENST00000484733 SLC24A4Q8NFF2 622 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 TMEM170AQ8WVE7 144 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 PRRT1Q99946 306 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 MRPS26Q9BYN8 205 aaKnown RBP8.32□□□□□ -1.08
SCFD1-206ENST00000484733 APLNQ9ULZ1 77 aa8.32□□□□□ -1.08
SCFD1-206ENST00000484733 CTDSP2O14595 271 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 RND2P52198 227 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 NMSQ5H8A3 153 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 TMEM268Q5VZI3 342 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 CSNK1G2-AS1Q8NCQ2 148 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 OR4C16Q8NGL9 310 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 X6R8D5 127 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 IGHV4-28A0A0C4DH34 117 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 KNCNA6PVL3 124 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 CEBPZOSA8MTT3 80 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 DEFB4AO15263 64 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 RGS5O15539 181 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 GSTZ1O43708 216 aaPredicted RBP8.31□□□□□ -1.08
SCFD1-206ENST00000484733 DEDDO75618 318 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 TOMM40O96008 361 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 ZNF688P0C7X2 276 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 C4BPBP20851 252 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 FAAP20Q6NZ36 180 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 RAB40CQ96S21 281 aa8.31□□□□□ -1.08
SCFD1-206ENST00000484733 ANKRD20A5PA0PJZ0 165 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 SULT1A3P0DMM9 295 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 SULT1A4P0DMN0 295 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 NPY1RP25929 384 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 ATP5IP56385 69 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-206ENST00000484733 SPCS2Q15005 226 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 GPR141Q7Z602 305 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 SCGB3A2Q96PL1 93 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 BCL7BQ9BQE9 202 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 CCDC59Q9P031 241 aaKnown RBP8.3□□□□□ -1.08
SCFD1-206ENST00000484733 KCNIP3Q9Y2W7 256 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 NXPH3O95157 252 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
SCFD1-206ENST00000484733 ACTL10Q5JWF8 245 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 U3KQ87 197 aa8.3□□□□□ -1.08
SCFD1-206ENST00000484733 BUB3O43684 328 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 CCR6P51684 374 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 CLVS1Q8IUQ0 354 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-206ENST00000484733 OR51S1Q8NGJ8 323 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 NPIPB3Q92617 1050 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 DIRAS2Q96HU8 199 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 HSPB7Q9UBY9 170 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 TBC1D24Q9ULP9 559 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 TRAV10A0A0B4J240 114 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 IL4P05112 153 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 RD3LP0DJH9 198 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 NUP62P37198 522 aaPredicted RBP8.29□□□□□ -1.08
SCFD1-206ENST00000484733 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
SCFD1-206ENST00000484733 PRR20EP86478 221 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 PRR20CP86479 221 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 PRR20DP86480 221 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 PRR20BP86481 221 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 PRR20AP86496 221 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 IL18Q14116 193 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 DYNC2LI1Q8TCX1 351 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 C1QTNF4Q9BXJ3 329 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 NRN1Q9NPD7 142 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 RSL24D1Q9UHA3 163 aaKnown RBP8.29□□□□□ -1.08
SCFD1-206ENST00000484733 SCP2D1Q9UJQ7 156 aa8.29□□□□□ -1.08
SCFD1-206ENST00000484733 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
SCFD1-206ENST00000484733 A0A0B4J2A0 478 aa8.28□□□□□ -1.08
SCFD1-206ENST00000484733 IGLL5B9A064 214 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms