RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CD5P06127 495 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 SLC25A4P12235 298 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 VAMP1P23763 118 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 NPY1RP25929 384 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 C4orf46Q504U0 113 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 HSPB7Q9UBY9 170 aa10.37□□□□□ -0.75
VARS-225ENST00000482996 LOC102724200A0A096LPH7 203 aaPredicted RBP10.36□□□□□ -0.75
VARS-225ENST00000482996 A0A1B0GU03 582 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 IFNA10P01566 189 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 MLANAQ16655 118 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 DTD1Q8TEA8 209 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 RNF2Q99496 336 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 TMEM231Q9H6L2 316 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 MRPL36Q9P0J6 103 aaKnown RBP10.36□□□□□ -0.75
VARS-225ENST00000482996 UBQLN2Q9UHD9 624 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 U3KQ87 197 aa10.36□□□□□ -0.75
VARS-225ENST00000482996 IGHV3OR16-13A0A075B7E8 117 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 IGHV3-74A0A0B4J1X5 117 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 SSNA1O43805 119 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 LYL1P12980 280 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 ANXA7P20073 488 aaKnown RBP10.35□□□□□ -0.75
VARS-225ENST00000482996 CMC4P56277 68 aaPredicted RBP10.35□□□□□ -0.75
VARS-225ENST00000482996 PAFAH1B2P68402 229 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 OR1S2Q8NGQ3 325 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 NARS2Q96I59 477 aaKnown RBP10.35□□□□□ -0.75
VARS-225ENST00000482996 METTL26Q96S19 204 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 RBKSQ9H477 322 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 ZFAND3Q9H8U3 227 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 RETNQ9HD89 108 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 FLVCR2Q9UPI3 526 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 RYR3Q15413 4870 aa10.35□□□□□ -0.75
VARS-225ENST00000482996 A0A1W2PS18 150 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 SFT2D2O95562 160 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 NPPCP23582 126 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 RND2P52198 227 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
VARS-225ENST00000482996 UBE2MP61081 183 aaKnown RBP10.34□□□□□ -0.75
VARS-225ENST00000482996 ODF3L2Q3SX64 289 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 TIGITQ495A1 244 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 PRSS54Q6PEW0 395 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 TCF24Q7RTU0 167 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 LRTM2Q8N967 370 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 ST8SIA2Q92186 375 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 VSIRQ9H7M9 311 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 EDA2RQ9HAV5 297 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 TMED3Q9Y3Q3 217 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 ALG5Q9Y673 324 aa10.34□□□□□ -0.75
VARS-225ENST00000482996 IGKV3-7A0A075B6H7 116 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 IGKV1-17P01599 117 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 IFNA4P05014 189 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 IL5P05113 134 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 OR4E1P0C645 316 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 SLC25A6P12236 298 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 OR10J1P30954 320 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 TFPI2P48307 235 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 APOC4P55056 127 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 PPP1R1AQ13522 171 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 Q8WTZ3 238 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 TMEM170AQ8WVE7 144 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 MED28Q9H204 178 aa10.33□□□□□ -0.76
VARS-225ENST00000482996 IGHV3-66A0A0C4DH42 116 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 FAM90A26D6RGX4 464 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 DNASE2O00115 360 aaPredicted RBP10.32□□□□□ -0.76
VARS-225ENST00000482996 PFDN1O60925 122 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 MED6O75586 246 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 IGLC1P0CG04 106 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 BCAP31P51572 246 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 YPEL3P61236 119 aaPredicted RBP10.32□□□□□ -0.76
VARS-225ENST00000482996 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
VARS-225ENST00000482996 CASC10Q5T4H9 136 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 FAM90A2PQ658T7 463 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 GBGT1Q8N5D6 347 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 COQ8AQ8NI60 647 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 ACY3Q96HD9 319 aa10.32□□□□□ -0.76
VARS-225ENST00000482996 A0A1B0GVG6 124 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 SNRPGP15A8MWD9 76 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 UBE2CO00762 179 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 PITX3O75364 302 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 DFFBO76075 338 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 APOHP02749 345 aaPredicted RBP10.31□□□□□ -0.76
VARS-225ENST00000482996 HOXB5P09067 269 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 CRYBB3P26998 211 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 LYG2Q86SG7 212 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 ZNF431Q8TF32 576 aaPredicted RBP10.31□□□□□ -0.76
VARS-225ENST00000482996 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 GRAMD2BQ96HH9 432 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 SEC22CQ9BRL7 303 aa10.31□□□□□ -0.76
VARS-225ENST00000482996 TRAV2A0A0B4J234 112 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 KIR2DL5BA0A0G2JN68 375 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 KIR2DL5BA0A0G2JPC4 375 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 C7orf66A4D0T2 115 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 IAPPP10997 89 aa10.3□□□□□ -0.76
VARS-225ENST00000482996 GPX4P36969 197 aaPredicted RBP10.3□□□□□ -0.76
VARS-225ENST00000482996 EIF2B2P49770 351 aaKnown RBP10.3□□□□□ -0.76
VARS-225ENST00000482996 RAB11AP62491 216 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms