RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SAMD13Q5VXD3 122 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 MFFQ9GZY8 342 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 MS4A6AQ9H2W1 248 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 SEPSECSQ9HD40 501 aaKnown RBP8.49□□□□□ -1.05
CCM2-213ENST00000480658 HSPB7Q9UBY9 170 aa8.49□□□□□ -1.05
CCM2-213ENST00000480658 KLK5Q9Y337 293 aaPredicted RBP8.49□□□□□ -1.05
CCM2-213ENST00000480658 CCDC160A6NGH7 325 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 FAM90A26D6RGX4 464 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 MED6O75586 246 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 IFNA10P01566 189 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 SPP1P10451 314 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 SLC25A6P12236 298 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 OR10J1P30954 320 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 UBE2MP61081 183 aaKnown RBP8.48□□□□□ -1.05
CCM2-213ENST00000480658 PYDC2Q56P42 97 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 LYG2Q86SG7 212 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 STHQ8IWL8 128 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 DTD1Q8TEA8 209 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 ST8SIA2Q92186 375 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 ZNF414Q96IQ9 312 aa8.48□□□□□ -1.05
CCM2-213ENST00000480658 CIB3Q96Q77 187 aaPredicted RBP8.48□□□□□ -1.05
CCM2-213ENST00000480658 A0A0G2JRQ6 117 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 CXorf65A6NEN9 183 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 CFDP00746 253 aaPredicted RBP8.47□□□□□ -1.05
CCM2-213ENST00000480658 IGHV3-48P01763 117 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCM2-213ENST00000480658 IGLC1P0CG04 106 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 GPX4P36969 197 aaPredicted RBP8.47□□□□□ -1.05
CCM2-213ENST00000480658 P2RY1P47900 373 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 TFPI2P48307 235 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 INPP1P49441 399 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 RND2P52198 227 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 NUTF2P61970 127 aaKnown RBP8.47□□□□□ -1.05
CCM2-213ENST00000480658 SNRPD3P62318 126 aaKnown RBP8.47□□□□□ -1.05
CCM2-213ENST00000480658 RAB11AP62491 216 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 TMEM187Q14656 261 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 PRSS54Q6PEW0 395 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 MORN3Q6PF18 240 aaPredicted RBP8.47□□□□□ -1.05
CCM2-213ENST00000480658 Q6ZRM9 215 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 LHFPL5Q8TAF8 219 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 GPR146Q96CH1 333 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 SOSTQ9BQB4 213 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 C11orf68Q9H3H3 251 aaKnown RBP8.47□□□□□ -1.05
CCM2-213ENST00000480658 FNDC4Q9H6D8 234 aaPredicted RBP8.47□□□□□ -1.05
CCM2-213ENST00000480658 RABAC1Q9UI14 185 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 TMED3Q9Y3Q3 217 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 SELENOKQ9Y6D0 94 aa8.47□□□□□ -1.05
CCM2-213ENST00000480658 IGKV3-7A0A075B6H7 116 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 NAP1L6A6NFF2 107 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 TOMM40O96008 361 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 IGKV1-17P01599 117 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 RPL35AP18077 110 aaKnown RBP8.46□□□□□ -1.06
CCM2-213ENST00000480658 RBMS2Q15434 407 aaKnown RBP8.46□□□□□ -1.06
CCM2-213ENST00000480658 OR8G2PQ6IF36 304 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 APRG1Q8IVJ8 170 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 LRTM2Q8N967 370 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 STXBP6Q8NFX7 210 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 OR1S1Q8NH92 325 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 SLC35E1Q96K37 410 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 FBXL17Q9UF56 701 aa8.46□□□□□ -1.06
CCM2-213ENST00000480658 IGHV3-49A0A0A0MS15 119 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 A0A0J9YWU9 116 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 CENPXA8MT69 81 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 IFNA4P05014 189 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 IL4P05112 153 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 RD3LP0DJH9 198 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 VAMP1P23763 118 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 KLF9Q13886 244 aaPredicted RBP8.45□□□□□ -1.06
CCM2-213ENST00000480658 CNPY1Q3B7I2 92 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 TMED4Q7Z7H5 227 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 GBGT1Q8N5D6 347 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 OR51G1Q8NGK1 321 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 TRIM63Q969Q1 353 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 RARRES2Q99969 163 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
CCM2-213ENST00000480658 CSMD3Q7Z407 3707 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 IGHV3OR16-13A0A075B7E8 117 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 IGHV3-74A0A0B4J1X5 117 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 K7EQG2 157 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 CA1P00915 261 aaPredicted RBP8.44□□□□□ -1.06
CCM2-213ENST00000480658 TCTAP57738 103 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 DEFB131AP59861 70 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 SUPT4H1P63272 117 aaKnown RBP8.44□□□□□ -1.06
CCM2-213ENST00000480658 TIGITQ495A1 244 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 TRIQKQ629K1 86 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 S100A7AQ86SG5 101 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 ACY3Q96HD9 319 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 NRN1Q9NPD7 142 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 V9GYH0 126 aa8.44□□□□□ -1.06
CCM2-213ENST00000480658 ZFP92A6NM28 416 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 C1orf194Q5T5A4 169 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 CEMP1Q6PRD7 247 aaPredicted RBP8.43□□□□□ -1.06
CCM2-213ENST00000480658 SIGLEC15Q6ZMC9 328 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 LYZL2Q7Z4W2 148 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 DCANP1Q8TF63 244 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 RNF125Q96EQ8 232 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 C7orf50Q9BRJ6 194 aaKnown RBP8.43□□□□□ -1.06
CCM2-213ENST00000480658 RBKSQ9H477 322 aa8.43□□□□□ -1.06
CCM2-213ENST00000480658 RNF24Q9Y225 148 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms