RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	SARNP	P82979	210 aa	Known RBP	1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	MYL5	Q02045	173 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	RELA	Q04206	551 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	ZNF181	Q2M3W8	571 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	TMEM78	Q5T7P6	136 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	EXOC3-AS1	Q8N2X6	119 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	LINC00471	Q8N535	108 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	OR2T10	Q8NGZ9	312 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	PFN4	Q8NHR9	129 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	PLEKHB2	Q96CS7	222 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	C8orf4	Q9NR00	106 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	EPDR1	Q9UM22	224 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	NCAPD3	P42695	1498 aa		1.69	□□□□□ -2.14
RBM39-231	ENST00000477334	SLIT2	O94813	1529 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	TMSB15B	A0A087X1C1	80 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	TRGV10	A0A0A0MS01	117 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	MUC21	A0A0G2JKD1	596 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	MUC21	A0A140T8X8	626 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	C7orf71	A4D174	169 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	MEIS3P1	A6NDR6	274 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	ARRDC5	A6NEK1	342 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	ORC5	O43913	435 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	IGKV1-16	P04430	117 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	CSN2	P05814	226 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	HTR1A	P08908	422 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	COX6A1	P12074	109 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	PEBP1	P30086	187 aa	Known RBP	1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	ARPC4	P59998	168 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	FOXF1	Q12946	379 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	ALX1	Q15699	326 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	KISS1	Q15726	138 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	TMEM128	Q5BJH2	165 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	TOMM20L	Q6UXN7	152 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	LRRC28	Q86X40	367 aa	Predicted RBP	1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	OR13D1	Q8NGV5	346 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	PPTC7	Q8NI37	304 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	CANT1	Q8WVQ1	401 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	DNAJC30	Q96LL9	226 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334		Q9BRP9	147 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	EFCAB11	Q9BUY7	163 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	SPANXA1	Q9NS26	97 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	NHP2	Q9NX24	153 aa	Known RBP	1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	CCL26	Q9Y258	94 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	LCT	P09848	1927 aa		1.68	□□□□□ -2.14
RBM39-231	ENST00000477334	MED1	Q15648	1581 aa	Predicted RBP	1.68	□□□□□ -2.14
RBM39-231	ENST00000477334		A0A0D9SEW6	157 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334		A0A1B0GVG6	124 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	FUOM	A2VDF0	154 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	TLCD2	A6NGC4	264 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	ARL5C	A6NH57	179 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	TMEM256-PLSCR3	K7ERE1	68 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	SDCBP	O00560	298 aa	Predicted RBP	1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	NDUFB3	O43676	98 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	TRGC2	P03986	189 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	RHOG	P84095	191 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	SLC38A11	Q08AI6	406 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	SURF2	Q15527	256 aa	Predicted RBP	1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	DEFB128	Q7Z7B8	93 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	ANGPTL5	Q86XS5	388 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	NUP35	Q8NFH5	326 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	OR52R1	Q8NGF1	315 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	OR10J5	Q8NHC4	309 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	WFDC5	Q8TCV5	224 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	SLAMF6	Q96DU3	332 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	CST9L	Q9H4G1	147 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	GINS2	Q9Y248	185 aa		1.67	□□□□□ -2.14
RBM39-231	ENST00000477334	ZCCHC11	Q5TAX3	1644 aa	Known RBP	1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	WDR90	Q96KV7	1748 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	BAHCC1	Q9P281	2608 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	TRGV4	A0A0C4DH28	118 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	IGKV1-9	A0A0C4DH69	117 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334		A0A1W2PRE2	83 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	OR51F1	A6NGY5	319 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	OR2T1	O43869	369 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	PMP2	P02689	132 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	CSRP1	P21291	193 aa	Known RBP	1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	AQP4	P55087	323 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	LTC4S	Q16873	150 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	RTL8B	Q17RB0	113 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	SPANXN5	Q5MJ07	72 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	FKBP1C	Q5VVH2	108 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	C22orf39	Q6P5X5	142 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	LCN15	Q6UWW0	184 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334		Q6ZTI0	123 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	PHF13	Q86YI8	300 aa	Predicted RBP	1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	TMEM35B	Q8NCS4	154 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334		Q8NDZ9	215 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	SLC30A7	Q8NEW0	376 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	STAG3L4	Q8TBR4	150 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	LZIC	Q8WZA0	190 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	ISOC1	Q96CN7	298 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	RMND5B	Q96G75	393 aa	Predicted RBP	1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	RTL8A	Q9BWD3	113 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	TMEM133	Q9H2Q1	129 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	OR52A1	Q9UKL2	312 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	BAIAP2	Q9UQB8	552 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	LAMTOR2	Q9Y2Q5	125 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	ASB4	Q9Y574	426 aa		1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	SCAF11	Q99590	1463 aa	Known RBP	1.66	□□□□□ -2.14
RBM39-231	ENST00000477334	SCN10A	Q9Y5Y9	1956 aa		1.66	□□□□□ -2.14

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