RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	GRAMD2B	Q96HH9	432 aa		6.57	□□□□□ -1.36
CHEK2-223	ENST00000472807	FNDC4	Q9H6D8	234 aa	Predicted RBP	6.57	□□□□□ -1.36
CHEK2-223	ENST00000472807	RSL24D1	Q9UHA3	163 aa	Known RBP	6.57	□□□□□ -1.36
CHEK2-223	ENST00000472807	SCP2D1	Q9UJQ7	156 aa		6.57	□□□□□ -1.36
CHEK2-223	ENST00000472807	KLK5	Q9Y337	293 aa	Predicted RBP	6.57	□□□□□ -1.36
CHEK2-223	ENST00000472807	VPS13D	Q5THJ4	4388 aa		6.57	□□□□□ -1.36
CHEK2-223	ENST00000472807	DNAH10	Q8IVF4	4471 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	DNAH6	Q9C0G6	4158 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	GSTZ1	O43708	216 aa	Predicted RBP	6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	IGKV1-17	P01599	117 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	SULT1A3	P0DMM9	295 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	SULT1A4	P0DMN0	295 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	SLC25A4	P12235	298 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	CRYBB3	P26998	211 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	OR10J1	P30954	320 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	P2RY1	P47900	373 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	EIF2B2	P49770	351 aa	Known RBP	6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	DEFB131A	P59861	70 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	EWSR1	Q01844	656 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	TIGIT	Q495A1	244 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	C2orf83	Q53S99	150 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	C4orf48	Q5BLP8	95 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	LEMD1	Q68G75	181 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	NOXA1	Q86UR1	476 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	STH	Q8IWL8	128 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	LILRB2	Q8N423	598 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	SLC24A4	Q8NFF2	622 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	STXBP6	Q8NFX7	210 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	OR1S2	Q8NGQ3	325 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	LHFPL5	Q8TAF8	219 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	RNASEH2C	Q8TDP1	164 aa	Known RBP	6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	IL22RA2	Q969J5	263 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	SCGB3A2	Q96PL1	93 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	RARRES2	Q99969	163 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	MCUB	Q9NWR8	336 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	MRPL36	Q9P0J6	103 aa	Known RBP	6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	GPR132	Q9UNW8	380 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	TMEM56-RWDD3	S4R434	201 aa		6.56	□□□□□ -1.36
CHEK2-223	ENST00000472807	ANKRD20A5P	A0PJZ0	165 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	NXPH3	O95157	252 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	LY6G6C	O95867	125 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	ANXA3	P12429	323 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	NPY1R	P25929	384 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	RND2	P52198	227 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	SRPX	P78539	464 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	MLANA	Q16655	118 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	ETFRF1	Q6IPR1	90 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	FAM24B	Q8N5W8	94 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	OR11H2	Q8NH07	326 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807		Q8WTZ3	238 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	GPR146	Q96CH1	333 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	MFF	Q9GZY8	342 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	C11orf68	Q9H3H3	251 aa	Known RBP	6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	KCNIP3	Q9Y2W7	256 aa		6.55	□□□□□ -1.36
CHEK2-223	ENST00000472807	PIGBOS1	A0A0B4J2F0	54 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	HELT	A6NFD8	242 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	FABP12	A6NFH5	140 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	IFNA10	P01566	189 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	IGLC1	P0CG04	106 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	AKR1C4	P17516	323 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	FAU	P35544	74 aa	Known RBP	6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	CCR6	P51684	374 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	YPEL3	P61236	119 aa	Predicted RBP	6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	TMEM187	Q14656	261 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	SMCO1	Q147U7	214 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	TMEM41B	Q5BJD5	291 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	NMS	Q5H8A3	153 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	PRSS54	Q6PEW0	395 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	PHLDA1	Q8WV24	401 aa	Predicted RBP	6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	ACY3	Q96HD9	319 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	SLIRP	Q9GZT3	109 aa	Known RBP	6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	PRR13	Q9NZ81	148 aa		6.54	□□□□□ -1.36
CHEK2-223	ENST00000472807	AGRN	O00468	2067 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807		A0A0B4J2A0	478 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807		H3BMQ9	156 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807		K7EQG2	157 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	IL4	P05112	153 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	ZNF688	P0C7X2	276 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	SPP1	P10451	314 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	AP2S1	P53680	142 aa	Predicted RBP	6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	AP3S2	P59780	193 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	DHRS2	Q13268	280 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	RBMS2	Q15434	407 aa	Known RBP	6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	TRPT1	Q86TN4	253 aa	Known RBP	6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	LGI3	Q8N145	548 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	MCFD2	Q8NI22	146 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	C11orf45	Q8TAV5	145 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	DTD1	Q8TEA8	209 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	DCANP1	Q8TF63	244 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	HSPB7	Q9UBY9	170 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	FBXL17	Q9UF56	701 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	SHPK	Q9UHJ6	478 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807		U3KQ87	197 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	HECTD4	Q9Y4D8	3996 aa		6.53	□□□□□ -1.36
CHEK2-223	ENST00000472807	IFNA4	P05014	189 aa		6.52	□□□□□ -1.37
CHEK2-223	ENST00000472807	RD3L	P0DJH9	198 aa		6.52	□□□□□ -1.37
CHEK2-223	ENST00000472807	TNFSF8	P32971	234 aa		6.52	□□□□□ -1.37
CHEK2-223	ENST00000472807	NUP62	P37198	522 aa	Predicted RBP	6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms