RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 MFFQ9GZY8 342 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 TNFSF18Q9UNG2 199 aa13.03□□□□□ -0.32
CCM2-205ENST00000472223 PRSS46E5RG02 174 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 IFNA5P01569 189 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 C1QBP02746 253 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 MYCNOSP40205 109 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 FAM106AQ4KMX7 169 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 HIST2H2BDQ6DRA6 164 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 TEPPQ6URK8 271 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 C18orf65Q6ZTR6 163 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 COL6A5A8TX70 2615 aa13.02□□□□□ -0.33
CCM2-205ENST00000472223 A0A0D9SG52 128 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 PPP5D1E7EU14 171 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 ARL16Q0P5N6 197 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 OR2F1Q13607 317 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 CLINT1Q14677 625 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 DEFB136Q30KP8 78 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 SCGB1C1Q8TD33 95 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 Q8WTZ3 238 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 ATP5SQ99766 215 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 SMIM3Q9BZL3 60 aa13.01□□□□□ -0.33
CCM2-205ENST00000472223 IGHV4OR15-8A0A075B7B6 117 aa13□□□□□ -0.33
CCM2-205ENST00000472223 A0A087WW49 117 aa13□□□□□ -0.33
CCM2-205ENST00000472223 TAAR5O14804 337 aa13□□□□□ -0.33
CCM2-205ENST00000472223 YIF1AO95070 293 aa13□□□□□ -0.33
CCM2-205ENST00000472223 CTSGP08311 255 aa13□□□□□ -0.33
CCM2-205ENST00000472223 ZNF266Q14584 549 aa13□□□□□ -0.33
CCM2-205ENST00000472223 HAPLN4Q86UW8 402 aa13□□□□□ -0.33
CCM2-205ENST00000472223 BORCS7-ASMTA0A0B4J1R7 106 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 UBE2L5PA0A1B0GUS4 154 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 G3V3Q6 166 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 MPDU1O75352 247 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 OR2C1O95371 312 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 CFDP00746 253 aaPredicted RBP12.99□□□□□ -0.33
CCM2-205ENST00000472223 TRBV12-3P01733 135 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 C4BPBP20851 252 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 ZNF600Q6ZNG1 722 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 ZNF709Q8N972 641 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 SPATA3Q8NHX4 192 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 RAX2Q96IS3 184 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 NEURL2Q9BR09 285 aa12.99□□□□□ -0.33
CCM2-205ENST00000472223 KANTRA0A1W2PQU2 76 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 ADARB2-AS1A8MUL3 147 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 BMPR1BO00238 502 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 IGLC1P0CG04 106 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 RD3LP0DJH9 198 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 HOXD3P31249 432 aaPredicted RBP12.98□□□□□ -0.33
CCM2-205ENST00000472223 YPEL3P61236 119 aaPredicted RBP12.98□□□□□ -0.33
CCM2-205ENST00000472223 SELENOTP62341 195 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 ZNF345Q14585 488 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 VWC2Q2TAL6 325 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 TIGITQ495A1 244 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 TREML4Q6UXN2 200 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 GPHB5Q86YW7 130 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 THAP8Q8NA92 274 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 DUX3Q96PT4 197 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 TRGV9Q99603 122 aa12.98□□□□□ -0.33
CCM2-205ENST00000472223 MRPL36Q9P0J6 103 aaKnown RBP12.98□□□□□ -0.33
CCM2-205ENST00000472223 RNF222A6NCQ9 220 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 C17orf112F2Z3M2 114 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 F8W735 103 aaPredicted RBP12.97□□□□□ -0.33
CCM2-205ENST00000472223 NDUFA4O00483 81 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 FGF7P21781 194 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 S100A7P31151 101 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
CCM2-205ENST00000472223 BTNL8Q6UX41 500 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 C1QL4Q86Z23 238 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 BPIFCQ8NFQ6 507 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 OR11H4Q8NGC9 324 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 GINS3Q9BRX5 216 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 CHRDL1Q9BU40 450 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 KCNIP2Q9NS61 270 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 PEMTQ9UBM1 199 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 FBXL17Q9UF56 701 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 PFDN2Q9UHV9 154 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 WDR83OSQ9Y284 106 aa12.97□□□□□ -0.33
CCM2-205ENST00000472223 TENM1Q9UKZ4 2725 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 IGHV3-35A0A0C4DH35 117 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 TOMM40O96008 361 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 CAMLGP49069 296 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 SLURP1P55000 103 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 CYP2G1PQ6ZSU1 146 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 S100A7AQ86SG5 101 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 KCNRGQ8N5I3 272 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 NARS2Q96I59 477 aaKnown RBP12.96□□□□□ -0.33
CCM2-205ENST00000472223 ARPC5LQ9BPX5 153 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 C20orf24Q9BUV8 137 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 ELOVL1Q9BW60 279 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 UFC1Q9Y3C8 167 aa12.96□□□□□ -0.33
CCM2-205ENST00000472223 AGPAT2O15120 278 aa12.95□□□□□ -0.34
CCM2-205ENST00000472223 JTBO76095 146 aa12.95□□□□□ -0.34
CCM2-205ENST00000472223 ADMP35318 185 aa12.95□□□□□ -0.34
CCM2-205ENST00000472223 SYNJ2BPP57105 145 aa12.95□□□□□ -0.34
CCM2-205ENST00000472223 EIF5AP63241 154 aaKnown RBP12.95□□□□□ -0.34
CCM2-205ENST00000472223 FHL3Q13643 280 aa12.95□□□□□ -0.34
CCM2-205ENST00000472223 Q6ZRG5 221 aa12.95□□□□□ -0.34
CCM2-205ENST00000472223 OR51G1Q8NGK1 321 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms