RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DISC1C4P0D8 188 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 ZNF688P0C7X2 276 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 IGLC1P0CG04 106 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 FAAP20Q6NZ36 180 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 SELENOHQ8IZQ5 122 aaKnown RBP12.73□□□□□ -0.37
COL7A1-208ENST00000470076 Q8NAQ8 132 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 Q8WTZ3 238 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 CACNG5Q9UF02 275 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 CACFD1Q9UGQ2 172 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 U3KQE9 123 aa12.73□□□□□ -0.37
COL7A1-208ENST00000470076 C11orf94C9JXX5 98 aa12.72□□□□□ -0.37
COL7A1-208ENST00000470076 GIG44P09565 113 aaPredicted RBP12.72□□□□□ -0.37
COL7A1-208ENST00000470076 RND2P52198 227 aa12.72□□□□□ -0.37
COL7A1-208ENST00000470076 AP2S1P53680 142 aaPredicted RBP12.72□□□□□ -0.37
COL7A1-208ENST00000470076 YPEL3P61236 119 aaPredicted RBP12.72□□□□□ -0.37
COL7A1-208ENST00000470076 TMEM268Q5VZI3 342 aa12.72□□□□□ -0.37
COL7A1-208ENST00000470076 PRSS54Q6PEW0 395 aa12.72□□□□□ -0.37
COL7A1-208ENST00000470076 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
COL7A1-208ENST00000470076 SMIM4Q8WVI0 70 aa12.72□□□□□ -0.37
COL7A1-208ENST00000470076 VPS13DQ5THJ4 4388 aa12.72□□□□□ -0.37
COL7A1-208ENST00000470076 CRYM-AS1A6NIL9 109 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 CEBPZOSA8MTT3 80 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 CTDSP2O14595 271 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 HNRNPCP07910 306 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL7A1-208ENST00000470076 AKAIN1P0CW23 69 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 MIFP14174 115 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 OR10J1P30954 320 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 DHRS2Q13268 280 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 ETFRF1Q6IPR1 90 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 NOXA1Q86UR1 476 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 GPR146Q96CH1 333 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 GPR132Q9UNW8 380 aa12.71□□□□□ -0.37
COL7A1-208ENST00000470076 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 ZNF705EA8MWA4 302 aaPredicted RBP12.7□□□□□ -0.38
COL7A1-208ENST00000470076 ACTL10Q5JWF8 245 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 C16orf54Q6UWD8 224 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 OR4C16Q8NGL9 310 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 GLMPQ8WWB7 406 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 PRRT1Q99946 306 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 RABL2AQ9UBK7 228 aaPredicted RBP12.7□□□□□ -0.38
COL7A1-208ENST00000470076 RABL2BQ9UNT1 228 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 TMEM56-RWDD3S4R434 201 aa12.7□□□□□ -0.38
COL7A1-208ENST00000470076 CTDSPLO15194 276 aa12.69□□□□□ -0.38
COL7A1-208ENST00000470076 RBMY1A1P0DJD3 496 aaKnown RBP12.69□□□□□ -0.38
COL7A1-208ENST00000470076 RBMY1CP0DJD4 496 aa12.69□□□□□ -0.38
COL7A1-208ENST00000470076 C4BPBP20851 252 aa12.69□□□□□ -0.38
COL7A1-208ENST00000470076 NPY1RP25929 384 aa12.69□□□□□ -0.38
COL7A1-208ENST00000470076 RBMY1FQ15415 496 aaKnown RBP12.69□□□□□ -0.38
COL7A1-208ENST00000470076 GPR141Q7Z602 305 aa12.69□□□□□ -0.38
COL7A1-208ENST00000470076 IL22RA2Q969J5 263 aa12.69□□□□□ -0.38
COL7A1-208ENST00000470076 KCNIP3Q9Y2W7 256 aa12.69□□□□□ -0.38
COL7A1-208ENST00000470076 IGLL5B9A064 214 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 IL4P05112 153 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 SULT1A3P0DMM9 295 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 SULT1A4P0DMN0 295 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 IL18Q14116 193 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 NMSQ5H8A3 153 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 CENPSQ8N2Z9 138 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 OR51S1Q8NGJ8 323 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 TMEM170AQ8WVE7 144 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 DIRAS2Q96HU8 199 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 RAB40CQ96S21 281 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 MRPS26Q9BYN8 205 aaKnown RBP12.68□□□□□ -0.38
COL7A1-208ENST00000470076 SEPSECSQ9HD40 501 aaKnown RBP12.68□□□□□ -0.38
COL7A1-208ENST00000470076 X6R8D5 127 aa12.68□□□□□ -0.38
COL7A1-208ENST00000470076 GSTZ1O43708 216 aaPredicted RBP12.67□□□□□ -0.38
COL7A1-208ENST00000470076 TOMM40O96008 361 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 RD3LP0DJH9 198 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 HLA-DMBP28068 263 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 ALDH3B2P48448 385 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
COL7A1-208ENST00000470076 SPCS2Q15005 226 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 USF2Q15853 346 aaPredicted RBP12.67□□□□□ -0.38
COL7A1-208ENST00000470076 CLVS1Q8IUQ0 354 aaPredicted RBP12.67□□□□□ -0.38
COL7A1-208ENST00000470076 CSNK1G2-AS1Q8NCQ2 148 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 NPIPB3Q92617 1050 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 ACY3Q96HD9 319 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 SCGB3A2Q96PL1 93 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 APLNQ9ULZ1 77 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 DNAH6Q9C0G6 4158 aa12.67□□□□□ -0.38
COL7A1-208ENST00000470076 FAM90A26D6RGX4 464 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 BUB3O43684 328 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 NUTF2P61970 127 aaKnown RBP12.66□□□□□ -0.38
COL7A1-208ENST00000470076 PRR20EP86478 221 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 PRR20CP86479 221 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 PRR20DP86480 221 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 PRR20BP86481 221 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 PRR20AP86496 221 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 C1QTNF4Q9BXJ3 329 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 NRN1Q9NPD7 142 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 CLEC5AQ9NY25 188 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 U3KQ87 197 aa12.66□□□□□ -0.38
COL7A1-208ENST00000470076 TRAV10A0A0B4J240 114 aa12.65□□□□□ -0.38
COL7A1-208ENST00000470076 ANKRD20A5PA0PJZ0 165 aa12.65□□□□□ -0.38
COL7A1-208ENST00000470076 NXPH3O95157 252 aa12.65□□□□□ -0.38
COL7A1-208ENST00000470076 IFNA10P01566 189 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms