RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 KIR2DL5BA0A0G2JPC4 375 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 A0A1W2PS18 150 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 NAP1L6A6NFF2 107 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 UBE2CO00762 179 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 DFFBO76075 338 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 SFT2D2O95562 160 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 IGLC1P0CG04 106 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 VAMP1P23763 118 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 APOC4P55056 127 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 YPEL3P61236 119 aaPredicted RBP13.45□□□□□ -0.26
CGREF1-208ENST00000467539 KIR2DL5AQ8N109 375 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 OR1S2Q8NGQ3 325 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 OR1S1Q8NH92 325 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 KIR2DL5BQ8NHK3 375 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 Q8WTZ3 238 aa13.45□□□□□ -0.26
CGREF1-208ENST00000467539 CSMD3Q7Z407 3707 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 IGKV3-7A0A075B6H7 116 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 TFPI2P48307 235 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 RND2P52198 227 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 UBE2MP61081 183 aaKnown RBP13.44□□□□□ -0.26
CGREF1-208ENST00000467539 RBMS2Q15434 407 aaKnown RBP13.44□□□□□ -0.26
CGREF1-208ENST00000467539 Q6ZWC4 215 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 CENPSQ8N2Z9 138 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 GBGT1Q8N5D6 347 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 IL17DQ8TAD2 202 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 NPIPB3Q92617 1050 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 METTL26Q96S19 204 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 SDHCQ99643 169 aaPredicted RBP13.44□□□□□ -0.26
CGREF1-208ENST00000467539 MS4A6AQ9H2W1 248 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 TMED3Q9Y3Q3 217 aa13.44□□□□□ -0.26
CGREF1-208ENST00000467539 TRAV2A0A0B4J234 112 aa13.43□□□□□ -0.26
CGREF1-208ENST00000467539 OR10J1P30954 320 aa13.43□□□□□ -0.26
CGREF1-208ENST00000467539 GPX4P36969 197 aaPredicted RBP13.43□□□□□ -0.26
CGREF1-208ENST00000467539 INPP1P49441 399 aa13.43□□□□□ -0.26
CGREF1-208ENST00000467539 PPP1R1AQ13522 171 aa13.43□□□□□ -0.26
CGREF1-208ENST00000467539 APRG1Q8IVJ8 170 aa13.43□□□□□ -0.26
CGREF1-208ENST00000467539 TP53TG1Q9Y2A0 90 aa13.43□□□□□ -0.26
CGREF1-208ENST00000467539 U3KQE9 123 aa13.43□□□□□ -0.26
CGREF1-208ENST00000467539 IGHV3-66A0A0C4DH42 116 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 FAM90A26D6RGX4 464 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 DNASE2O00115 360 aaPredicted RBP13.42□□□□□ -0.26
CGREF1-208ENST00000467539 NDUFB6O95139 128 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 TRIQKQ629K1 86 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 ZFAND6Q6FIF0 208 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 WFDC3Q8IUB2 231 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 STPG3Q8N7X2 389 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 MAP6D1Q9H9H5 199 aa13.42□□□□□ -0.26
CGREF1-208ENST00000467539 SPRY2O43597 315 aa13.41□□□□□ -0.26
CGREF1-208ENST00000467539 IFNA4P05014 189 aa13.41□□□□□ -0.26
CGREF1-208ENST00000467539 RPL11P62913 178 aaKnown RBP13.41□□□□□ -0.26
CGREF1-208ENST00000467539 NARS2Q96I59 477 aaKnown RBP13.41□□□□□ -0.26
CGREF1-208ENST00000467539 C9orf170A2RU37 121 aa13.4□□□□□ -0.26
CGREF1-208ENST00000467539 CENPXA8MT69 81 aa13.4□□□□□ -0.26
CGREF1-208ENST00000467539 MED6O75586 246 aa13.4□□□□□ -0.26
CGREF1-208ENST00000467539 RD3LP0DJH9 198 aa13.4□□□□□ -0.26
CGREF1-208ENST00000467539 RPL35AP18077 110 aaKnown RBP13.4□□□□□ -0.26
CGREF1-208ENST00000467539 ACY3Q96HD9 319 aa13.4□□□□□ -0.26
CGREF1-208ENST00000467539 GRAMD2BQ96HH9 432 aa13.4□□□□□ -0.26
CGREF1-208ENST00000467539 C7orf50Q9BRJ6 194 aaKnown RBP13.4□□□□□ -0.26
CGREF1-208ENST00000467539 RYR3Q15413 4870 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 TOMM40O96008 361 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 HOXB5P09067 269 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 P2RY1P47900 373 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 RAB11AP62491 216 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 GAMTQ14353 236 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 ZNF124Q15973 351 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 GGNBP1Q5YKI7 109 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 RNF183Q96D59 192 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 CSTL1Q9H114 145 aa13.39□□□□□ -0.27
CGREF1-208ENST00000467539 LINC00854A0A1B0GVQ3 168 aa13.38□□□□□ -0.27
CGREF1-208ENST00000467539 HNRNPCP07910 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
CGREF1-208ENST00000467539 PSG1P11464 419 aa13.38□□□□□ -0.27
CGREF1-208ENST00000467539 CNPY1Q3B7I2 92 aa13.38□□□□□ -0.27
CGREF1-208ENST00000467539 C16orf54Q6UWD8 224 aa13.38□□□□□ -0.27
CGREF1-208ENST00000467539 CIB3Q96Q77 187 aaPredicted RBP13.38□□□□□ -0.27
CGREF1-208ENST00000467539 FLVCR2Q9UPI3 526 aa13.38□□□□□ -0.27
CGREF1-208ENST00000467539 TENM2Q9NT68 2774 aa13.38□□□□□ -0.27
CGREF1-208ENST00000467539 K7EQG2 157 aa13.37□□□□□ -0.27
CGREF1-208ENST00000467539 SYNGR2O43760 224 aa13.37□□□□□ -0.27
CGREF1-208ENST00000467539 IL4P05112 153 aa13.37□□□□□ -0.27
CGREF1-208ENST00000467539 IL7P13232 177 aa13.37□□□□□ -0.27
CGREF1-208ENST00000467539 AP2S1P53680 142 aaPredicted RBP13.37□□□□□ -0.27
CGREF1-208ENST00000467539 DEFB131AP59861 70 aa13.37□□□□□ -0.27
CGREF1-208ENST00000467539 RPP30P78346 268 aaKnown RBP13.37□□□□□ -0.27
CGREF1-208ENST00000467539 RABAC1Q9UI14 185 aa13.37□□□□□ -0.27
CGREF1-208ENST00000467539 DYNC2H1Q8NCM8 4307 aaKnown RBP13.36□□□□□ -0.27
CGREF1-208ENST00000467539 HELTA6NFD8 242 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 OR4E1P0C645 316 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 IAPPP10997 89 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 BTCP35070 178 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
CGREF1-208ENST00000467539 ID3Q02535 119 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 USF2Q15853 346 aaPredicted RBP13.36□□□□□ -0.27
CGREF1-208ENST00000467539 DEFB135Q30KP9 77 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 FAM24BQ8N5W8 94 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 OR51G1Q8NGK1 321 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 SLC35E1Q96K37 410 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 MAGT1Q9H0U3 335 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 STARD9Q9P2P6 4700 aa13.36□□□□□ -0.27
CGREF1-208ENST00000467539 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms