RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ADARB2-AS1A8MUL3 147 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 IGHV3-11P01762 117 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 ADMP35318 185 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 ZNF266Q14584 549 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 TEPPQ6URK8 271 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 BTNL8Q6UX41 500 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 CLEC19AQ6UXS0 136 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 TRGV9Q99603 122 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 MGST2Q99735 147 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 CHRDL1Q9BU40 450 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 SLC45A2Q9UMX9 530 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 TENM1Q9UKZ4 2725 aa11.07□□□□□ -0.64
COL6A1-202ENST00000463060 TRAV30A0A087WSZ9 112 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 UBE2L5PA0A1B0GUS4 154 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 SMCO3A2RU48 225 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 MPDU1O75352 247 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 TRBV12-3P01733 135 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 LGALS1P09382 135 aaKnown RBP11.06□□□□□ -0.64
COL6A1-202ENST00000463060 OR10J1P30954 320 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 AKR1C1Q04828 323 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 HIST2H2BDQ6DRA6 164 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 C18orf65Q6ZTR6 163 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 STOML3Q8TAV4 291 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 CITED2Q99967 270 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-202ENST00000463060 GINS3Q9BRX5 216 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 C19orf24Q9BVV8 132 aa11.06□□□□□ -0.64
COL6A1-202ENST00000463060 GAR1Q9NY12 217 aaKnown RBP11.06□□□□□ -0.64
COL6A1-202ENST00000463060 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 OR2T8A6NH00 312 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 AGPAT2O15120 278 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 GNG7O60262 68 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 IFNA5P01569 189 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 FGF7P21781 194 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 GPR183P32249 361 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 YPEL3P61236 119 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-202ENST00000463060 Q56UQ5 140 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 FAM209BQ5JX69 171 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 SPSB3Q6PJ21 355 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 TMEM182Q6ZP80 229 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-202ENST00000463060 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 C11orf44Q8N8P7 122 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 C4orf3Q8WVX3 66 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 GGTLC1Q9BX51 225 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
COL6A1-202ENST00000463060 TSSC4Q9Y5U2 329 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-202ENST00000463060 RFNGQ9Y644 331 aa11.05□□□□□ -0.64
COL6A1-202ENST00000463060 BMPR1BO00238 502 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 TGOLN2O43493 480 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 LINC00869P0C866 280 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 C4BPBP20851 252 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 PRR20EP86478 221 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 PRR20CP86479 221 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 PRR20DP86480 221 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 PRR20BP86481 221 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 PRR20AP86496 221 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 ZNF90Q03938 601 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 TIGITQ495A1 244 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 CYP2G1PQ6ZSU1 146 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 CITED1Q99966 193 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 ZNF471Q9BX82 626 aaPredicted RBP11.04□□□□□ -0.64
COL6A1-202ENST00000463060 NPCDR1Q9BY65 106 aa11.04□□□□□ -0.64
COL6A1-202ENST00000463060 FBN3Q75N90 2809 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 ANKRD34BA5PLL1 514 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 ZFP92A6NM28 416 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 PPP5D1E7EU14 171 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 SPP1P10451 314 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 ATP6V0CP27449 155 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 RPL29P47914 159 aaKnown RBP11.03□□□□□ -0.64
COL6A1-202ENST00000463060 CAMLGP49069 296 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 SELENOTP62341 195 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 BAP18Q8IXM2 172 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 SCGB1C1Q8TD33 95 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 TMEM158Q8WZ71 300 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 OR5B12Q96R08 314 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 RSG1Q9BU20 258 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 PLA2G2EQ9NZK7 142 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
COL6A1-202ENST00000463060 NUPL2O15504 423 aaKnown RBP11.02□□□□□ -0.65
COL6A1-202ENST00000463060 TOMM40O96008 361 aa11.02□□□□□ -0.65
COL6A1-202ENST00000463060 HSPB1P04792 205 aaKnown RBP11.02□□□□□ -0.65
COL6A1-202ENST00000463060 PSG1P11464 419 aa11.02□□□□□ -0.65
COL6A1-202ENST00000463060 GATA2P23769 480 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-202ENST00000463060 ARL3P36405 182 aa11.02□□□□□ -0.65
COL6A1-202ENST00000463060 RAB31Q13636 194 aa11.02□□□□□ -0.65
COL6A1-202ENST00000463060 HSD17B11Q8NBQ5 300 aa11.02□□□□□ -0.65
COL6A1-202ENST00000463060 ST8SIA2Q92186 375 aa11.02□□□□□ -0.65
COL6A1-202ENST00000463060 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-202ENST00000463060 PSMG3Q9BT73 122 aaPredicted RBP11.02□□□□□ -0.65
COL6A1-202ENST00000463060 IGHV4OR15-8A0A075B7B6 117 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 A0A087WW49 117 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 WI2-2373I1.2A0A1W2PRP0 233 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 GGCTO75223 188 aaKnown RBP11.01□□□□□ -0.65
COL6A1-202ENST00000463060 YIF1AO95070 293 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 OR2C1O95371 312 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 CFDP00746 253 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-202ENST00000463060 RD3LP0DJH9 198 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 TPT1P13693 172 aaKnown RBP11.01□□□□□ -0.65
COL6A1-202ENST00000463060 PLP1P60201 277 aa11.01□□□□□ -0.65
COL6A1-202ENST00000463060 EIF5AP63241 154 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms