RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 TAS2R19P59542 299 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 ACTL10Q5JWF8 245 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 STEAP1BQ6NZ63 245 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 PRSS54Q6PEW0 395 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 FAM219AQ8IW50 185 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 CSNK1G2-AS1Q8NCQ2 148 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 OR1S2Q8NGQ3 325 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 GLYATL2Q8WU03 294 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 GLMPQ8WWB7 406 aa10.64□□□□□ -0.71
SMPD4-216ENST00000461187 RTBDNQ9BSG5 229 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-216ENST00000461187 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-216ENST00000461187 RPS10-NUDT3A0A1W2PQS6 291 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 GABARAPO95166 117 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 RND2P52198 227 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 DHRS2Q13268 280 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 C2orf83Q53S99 150 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 C16orf54Q6UWD8 224 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 Q6ZTC4 211 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 SELENOHQ8IZQ5 122 aaKnown RBP10.63□□□□□ -0.71
SMPD4-216ENST00000461187 C15orf40Q8WUR7 153 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 HEYLQ9NQ87 328 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-216ENST00000461187 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
SMPD4-216ENST00000461187 TEX13DA0A0J9YY54 714 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-216ENST00000461187 HELTA6NFD8 242 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 GABARAPH6UMI1 98 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 HNRNPCP07910 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMPD4-216ENST00000461187 OR10J1P30954 320 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 EIF2B2P49770 351 aaKnown RBP10.62□□□□□ -0.71
SMPD4-216ENST00000461187 YPEL3P61236 119 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-216ENST00000461187 DHODHQ02127 395 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 FAAP20Q6NZ36 180 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 RNASEH2CQ8TDP1 164 aaKnown RBP10.62□□□□□ -0.71
SMPD4-216ENST00000461187 Q8WTZ3 238 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 TMEM170AQ8WVE7 144 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 RBPMSQ93062 196 aaKnown RBP10.62□□□□□ -0.71
SMPD4-216ENST00000461187 GPR146Q96CH1 333 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 RAB40CQ96S21 281 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 NAA60Q9H7X0 242 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 CACNG5Q9UF02 275 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 TBC1D24Q9ULP9 559 aa10.62□□□□□ -0.71
SMPD4-216ENST00000461187 C14orf166Q9Y224 244 aaKnown RBP10.62□□□□□ -0.71
SMPD4-216ENST00000461187 TRAV10A0A0B4J240 114 aa10.61□□□□□ -0.71
SMPD4-216ENST00000461187 NXPH3O95157 252 aa10.61□□□□□ -0.71
SMPD4-216ENST00000461187 SLC25A4P12235 298 aa10.61□□□□□ -0.71
SMPD4-216ENST00000461187 AP2S1P53680 142 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-216ENST00000461187 SSBP1Q04837 148 aaKnown RBP10.61□□□□□ -0.71
SMPD4-216ENST00000461187 USF2Q15853 346 aaPredicted RBP10.61□□□□□ -0.71
SMPD4-216ENST00000461187 PSMG4Q5JS54 123 aa10.61□□□□□ -0.71
SMPD4-216ENST00000461187 SLC24A4Q8NFF2 622 aa10.61□□□□□ -0.71
SMPD4-216ENST00000461187 IGHV4-4A0A075B6R2 117 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 CRYM-AS1A6NIL9 109 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 FAM90A26D6RGX4 464 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 SMIM18P0DKX4 95 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 MEF2DQ14814 521 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 SURF2Q15527 256 aaPredicted RBP10.6□□□□□ -0.71
SMPD4-216ENST00000461187 GPR107Q5VW38 600 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 CELA1Q9UNI1 258 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 GPR132Q9UNW8 380 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 NACAE9PAV3 2078 aa10.6□□□□□ -0.71
SMPD4-216ENST00000461187 CEBPZOSA8MTT3 80 aa10.59□□□□□ -0.71
SMPD4-216ENST00000461187 BUB3O43684 328 aa10.59□□□□□ -0.71
SMPD4-216ENST00000461187 IL4P05112 153 aa10.59□□□□□ -0.71
SMPD4-216ENST00000461187 MRPS10P82664 201 aaKnown RBP10.59□□□□□ -0.71
SMPD4-216ENST00000461187 TMEM268Q5VZI3 342 aa10.59□□□□□ -0.71
SMPD4-216ENST00000461187 ETFRF1Q6IPR1 90 aa10.59□□□□□ -0.71
SMPD4-216ENST00000461187 NPIPB3Q92617 1050 aa10.59□□□□□ -0.71
SMPD4-216ENST00000461187 SEPSECSQ9HD40 501 aaKnown RBP10.59□□□□□ -0.71
SMPD4-216ENST00000461187 TMEM56-RWDD3S4R434 201 aa10.59□□□□□ -0.71
SMPD4-216ENST00000461187 DISC1C4P0D8 188 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 CTDSP2O14595 271 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 TOMM40O96008 361 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 NPY1RP25929 384 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
SMPD4-216ENST00000461187 C12orf74Q32Q52 190 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 NMSQ5H8A3 153 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 SIGLEC15Q6ZMC9 328 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 OR4C16Q8NGL9 310 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 SMIM4Q8WVI0 70 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 ACY3Q96HD9 319 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 RNF126Q9BV68 326 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 NRN1Q9NPD7 142 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 XCL2Q9UBD3 114 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 PKHD1P08F94 4074 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 FAT2Q9NYQ8 4349 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 KIAA1109Q2LD37 5005 aa10.58□□□□□ -0.72
SMPD4-216ENST00000461187 H3BMM0 161 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 RGS5O15539 181 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 AKAIN1P0CW23 69 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 RD3LP0DJH9 198 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 ZNF767PQ75MW2 155 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 NOXA1Q86UR1 476 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 CENPSQ8N2Z9 138 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 C1QTNF4Q9BXJ3 329 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 DNAH17Q9UFH2 4485 aa10.57□□□□□ -0.72
SMPD4-216ENST00000461187 DNAH2Q9P225 4427 aa10.56□□□□□ -0.72
SMPD4-216ENST00000461187 DEFB131BA0A096LNP1 70 aa10.56□□□□□ -0.72
SMPD4-216ENST00000461187 CTDSPLO15194 276 aa10.56□□□□□ -0.72
SMPD4-216ENST00000461187 GSTZ1O43708 216 aaPredicted RBP10.56□□□□□ -0.72
SMPD4-216ENST00000461187 AMBPP02760 352 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms