RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 TCEAL2Q9H3H9 227 aaPredicted RBP2.01□□□□□ -2.09
SPTLC1-203ENST00000461132 TMEM138Q9NPI0 162 aa2.01□□□□□ -2.09
SPTLC1-203ENST00000461132 GSKIPQ9P0R6 139 aa2.01□□□□□ -2.09
SPTLC1-203ENST00000461132 PSORS1C2Q9UIG4 136 aa2.01□□□□□ -2.09
SPTLC1-203ENST00000461132 OR52A1Q9UKL2 312 aa2.01□□□□□ -2.09
SPTLC1-203ENST00000461132 SIPA1L1O43166 1804 aa2.01□□□□□ -2.09
SPTLC1-203ENST00000461132 SETD5Q9C0A6 1442 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 DEGS1O15121 323 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 IGLV3-19P01714 112 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 PPBPP02775 128 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 TRGC2P03986 189 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 HTR1AP08908 422 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 ERHP84090 104 aaKnown RBP2□□□□□ -2.09
SPTLC1-203ENST00000461132 ZNF90Q03938 601 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 CCDC58Q4VC31 144 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 IGFL1Q6UW32 110 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 DHFR2Q86XF0 187 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 OR5A1Q8NGJ0 315 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 TCEAL4Q96EI5 215 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 BORCS8Q96FH0 119 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 CCDC115Q96NT0 180 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 GPX7Q96SL4 187 aaPredicted RBP2□□□□□ -2.09
SPTLC1-203ENST00000461132 ZNF471Q9BX82 626 aaPredicted RBP2□□□□□ -2.09
SPTLC1-203ENST00000461132 YIPF3Q9GZM5 350 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 FAM107BQ9H098 131 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 TMEM133Q9H2Q1 129 aa2□□□□□ -2.09
SPTLC1-203ENST00000461132 MARCOQ9UEW3 520 aaPredicted RBP2□□□□□ -2.09
SPTLC1-203ENST00000461132 IGHV1-18A0A0C4DH31 117 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 MEIS3P1A6NDR6 274 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 J3KT08 172 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 ARPC5O15511 151 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 CST7O76096 145 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 COX6A1P12074 109 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 SUPT4H1P63272 117 aaKnown RBP1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 C1orf140Q5VVS0 124 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 C22orf39Q6P5X5 142 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 OR4D11Q8NGI4 311 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 OR2T10Q8NGZ9 312 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 ZNF714Q96N38 554 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 PKMYT1Q99640 499 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 ADAT1Q9BUB4 502 aaKnown RBP1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 TMEM126AQ9H061 195 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 POPDC3Q9HBV1 291 aa1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 TRPM3Q9HCF6 1732 aaPredicted RBP1.99□□□□□ -2.09
SPTLC1-203ENST00000461132 ARHGEF10O15013 1369 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 MYH3P11055 1940 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 MYH2Q9UKX2 1941 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 A0A1W2PNM2 257 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 M0R378 163 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 OR2T1O43869 369 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 IFNA4P05014 189 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 TRGC1P0CF51 173 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 S100A11P31949 105 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 SRP9P49458 86 aaKnown RBP1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 EIF3IQ13347 325 aaKnown RBP1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 KISS1Q15726 138 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 DEFB128Q7Z7B8 93 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 ST6GALNAC3Q8NDV1 305 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 OR52R1Q8NGF1 315 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 OR4X2Q8NGF9 303 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 PFN4Q8NHR9 129 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 STAG3L4Q8TBR4 150 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 WFDC5Q8TCV5 224 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 TSC22D3Q99576 134 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 SLC25A21Q9BQT8 299 aaPredicted RBP1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 LXNQ9BS40 222 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 NPCDR1Q9BY65 106 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 RASL12Q9NYN1 266 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 JPT1Q9UK76 154 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 ZCCHC11Q5TAX3 1644 aaKnown RBP1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 ZNF407Q9C0G0 2248 aa1.98□□□□□ -2.09
SPTLC1-203ENST00000461132 LCTP09848 1927 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 TOPBP1Q92547 1522 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 CAMSAP2Q08AD1 1489 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 TRAV5A0A0B4J249 113 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 A0A0D9SEW6 157 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 RFPL4AA6NLU0 287 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 HMSDA8MTL9 139 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 FNDC10F2Z333 226 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 RFPL4AL1F8VTS6 287 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 C3orf84H3BNL1 204 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 SDCBPO00560 298 aaPredicted RBP1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 NDUFB3O43676 98 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 LYZL6O75951 148 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 HLA-EP13747 358 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 CMPK1P30085 196 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 DYNLT3P51808 116 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 POLR2HP52434 150 aaKnown RBP1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 KRTAP13-2Q52LG2 175 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 TMEM229BQ8NBD8 167 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 OR5D16Q8NGK9 328 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 PRADC1Q9BSG0 188 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 MRPL32Q9BYC8 188 aaKnown RBP1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 NAT8BQ9UHF3 227 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 MED31Q9Y3C7 131 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 RIC1Q4ADV7 1423 aa1.97□□□□□ -2.09
SPTLC1-203ENST00000461132 HECW1Q76N89 1606 aa1.96□□□□□ -2.1
SPTLC1-203ENST00000461132 TRAV36DV7A0A075B6V5 113 aa1.96□□□□□ -2.1
SPTLC1-203ENST00000461132 A0A1B0GX51 115 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms