RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 NXPH3O95157 252 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 ADMP35318 185 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 POLR2GP62487 172 aaKnown RBP eCLIP8.14□□□□□ -1.11
UBR4-208ENST00000459947 IL34Q6ZMJ4 242 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 MRAPQ8TCY5 172 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 SPAG8Q99932 426 aaPredicted RBP8.14□□□□□ -1.11
UBR4-208ENST00000459947 SLC25A31Q9H0C2 315 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 FNDC4Q9H6D8 234 aaPredicted RBP8.14□□□□□ -1.11
UBR4-208ENST00000459947 IGHV3-21A0A0B4J1V1 117 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 IGHV7-4-1A0A0J9YVY3 117 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 SELENOTP62341 195 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 ATP6V1FQ16864 119 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 TMEM14EPQ6UXP3 125 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 RBPMS2Q6ZRY4 209 aaKnown RBP8.14□□□□□ -1.11
UBR4-208ENST00000459947 THAP8Q8NA92 274 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 CHRDL1Q9BU40 450 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 C20orf24Q9BUV8 137 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 MAGT1Q9H0U3 335 aa8.14□□□□□ -1.11
UBR4-208ENST00000459947 RCL1Q9Y2P8 373 aaKnown RBP8.14□□□□□ -1.11
UBR4-208ENST00000459947 TRAV14DV4A0A0A6YYC5 116 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 NPPCP23582 126 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 PAFAH1B2P68402 229 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 DEFB114Q30KQ6 69 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 PXDC1Q5TGL8 231 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 SAMD13Q5VXD3 122 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 STX12Q86Y82 276 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 SMPXQ9UHP9 88 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 YIF1AO95070 293 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 IGLC1P0CG04 106 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 HBG1P69891 147 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 HBG2P69892 147 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 RAB31Q13636 194 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 ACY3Q96HD9 319 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 FBXL17Q9UF56 701 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 HELTA6NFD8 242 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 OR4C46A6NHA9 309 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 ZFP92A6NM28 416 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 K7EPK0 472 aa8.13□□□□□ -1.11
UBR4-208ENST00000459947 HNRNPCP07910 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
UBR4-208ENST00000459947 GOSR2O14653 212 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 DEDDO75618 318 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 MBPP02686 304 aaPredicted RBP8.12□□□□□ -1.11
UBR4-208ENST00000459947 AKR1C1Q04828 323 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 TMEM144Q7Z5S9 345 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 BPIFCQ8NFQ6 507 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 NPIPB3Q92617 1050 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 LSM5Q9Y4Y9 91 aaKnown RBP8.12□□□□□ -1.11
UBR4-208ENST00000459947 E5RGE8 158 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 BCAP31P51572 246 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 TOMM20LQ6UXN7 152 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 OR51G1Q8NGK1 321 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 PUS1Q9Y606 427 aaKnown RBP eCLIP8.12□□□□□ -1.11
UBR4-208ENST00000459947 WNK1Q9H4A3 2382 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 RD3LP0DJH9 198 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 AP2S1P53680 142 aaPredicted RBP8.12□□□□□ -1.11
UBR4-208ENST00000459947 S100A10P60903 97 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 TMEM170AQ8WVE7 144 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 KCNIP2Q9NS61 270 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 SVEP1Q4LDE5 3571 aa8.12□□□□□ -1.11
UBR4-208ENST00000459947 A8MZ25 164 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 CCSO14618 274 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 SPNP16150 400 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 TIGITQ495A1 244 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 RABAC1Q9UI14 185 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 SMAD5-AS1Q9Y6J3 95 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 TSPAN4O14817 238 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 BAXQ07812 192 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 IL15RAQ13261 267 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 MED28Q9H204 178 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 VSIRQ9H7M9 311 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 ZFAND3Q9H8U3 227 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 NPVFQ9HCQ7 196 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 IGKV1-17P01599 117 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 S100A11P31949 105 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 P2RY1P47900 373 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 GAMTQ14353 236 aa8.11□□□□□ -1.11
UBR4-208ENST00000459947 LYRM2Q9NU23 88 aaPredicted RBP8.11□□□□□ -1.11
UBR4-208ENST00000459947 KRTAP10-11P60412 298 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 FGL1Q08830 312 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 SEPSECSQ9HD40 501 aaKnown RBP8.1□□□□□ -1.11
UBR4-208ENST00000459947 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 CRYBB3P26998 211 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 SULT1A1P50225 295 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 TM4SF20Q53R12 229 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 C1orf194Q5T5A4 169 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 UNQ9165/PRO28630Q6UXU0 137 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 ZNF546Q86UE3 836 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 GPR82Q96P67 336 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 CUBNO60494 3623 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 MPTX1A8MV57 137 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 PRSS46E5RG02 174 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 DFFBO76075 338 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
UBR4-208ENST00000459947 GUCA2BQ16661 112 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 TMEM147Q9BVK8 224 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
UBR4-208ENST00000459947 CAV2P51636 162 aa8.09□□□□□ -1.11
UBR4-208ENST00000459947 CD300EQ496F6 205 aaPredicted RBP8.09□□□□□ -1.11
UBR4-208ENST00000459947 ACOT7LQ6ZUV0 252 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms