RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 HTR2BP41595 481 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 SURF2Q15527 256 aaPredicted RBP11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 TIGITQ495A1 244 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 Q6ZRM9 215 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 LILRB2Q8N423 598 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 OR4X1Q8NH49 305 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 LHFPL5Q8TAF8 219 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 GATAD1Q8WUU5 269 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 PRRT1Q99946 306 aa11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 RTBDNQ9BSG5 229 aaPredicted RBP11.58□□□□□ -0.56
CHCHD3-204ENST00000457942 P2RY1P47900 373 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 KLF9Q13886 244 aaPredicted RBP11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 MLANAQ16655 118 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 SPANXN2Q5MJ10 180 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 PVRIGQ6DKI7 326 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 STHQ8IWL8 128 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 SELENOHQ8IZQ5 122 aaKnown RBP11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 SLC24A4Q8NFF2 622 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 OR11H2Q8NH07 326 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 OR52E5Q8NH55 327 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 GLYATL2Q8WU03 294 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 GRAMD2BQ96HH9 432 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 SRRQ9GZT4 340 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 NDUFA13Q9P0J0 144 aa11.57□□□□□ -0.56
CHCHD3-204ENST00000457942 TRAV30A0A087WSZ9 112 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 TRAV2A0A0B4J234 112 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 LINC00854A0A1B0GVQ3 168 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 CRYM-AS1A6NIL9 109 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 ATF4P18848 351 aaPredicted RBP11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 RND2P52198 227 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 TOMM5Q8N4H5 51 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 GPR146Q96CH1 333 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
CHCHD3-204ENST00000457942 EIF2B2P49770 351 aaKnown RBP11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 TMEM187Q14656 261 aa11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 BSXQ3C1V8 233 aa11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 OR1S2Q8NGQ3 325 aa11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 FBXL17Q9UF56 701 aa11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 SCP2D1Q9UJQ7 156 aa11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 GPR132Q9UNW8 380 aa11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 KCNIP3Q9Y2W7 256 aa11.55□□□□□ -0.56
CHCHD3-204ENST00000457942 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 SULT1A3P0DMM9 295 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 SULT1A4P0DMN0 295 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 SLC25A4P12235 298 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 NPY1RP25929 384 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 OR10J1P30954 320 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 BAK1Q16611 211 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 C2orf83Q53S99 150 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 ETFRF1Q6IPR1 90 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 PRSS54Q6PEW0 395 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 Q8WTZ3 238 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 SCGB3A2Q96PL1 93 aa11.54□□□□□ -0.56
CHCHD3-204ENST00000457942 VPS13DQ5THJ4 4388 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 DEFB4AO15263 64 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 IFNA10P01566 189 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 IGKV1-17P01599 117 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 HNRNPCP07910 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 AKR1C4P17516 323 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 CRYBB3P26998 211 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 FAUP35544 74 aaKnown RBP11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 RBMS2Q15434 407 aaKnown RBP11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 AARDQ4LEZ3 155 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 TRIQKQ629K1 86 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 NOXA1Q86UR1 476 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 ACY3Q96HD9 319 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 SDHCQ99643 169 aaPredicted RBP11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 MFFQ9GZY8 342 aa11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 C11orf68Q9H3H3 251 aaKnown RBP11.53□□□□□ -0.56
CHCHD3-204ENST00000457942 AGRNO00468 2067 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 HELTA6NFD8 242 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 K7EQG2 157 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 IFNA4P05014 189 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 IL4P05112 153 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 IGLC1P0CG04 106 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 ANXA3P12429 323 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 INPP1P49441 399 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 AP3S2P59780 193 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 DHRS2Q13268 280 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 CNPY1Q3B7I2 92 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 TMED4Q7Z7H5 227 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 IL22RA2Q969J5 263 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 CACFD1Q9UGQ2 172 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 TMEM56-RWDD3S4R434 201 aa11.52□□□□□ -0.57
CHCHD3-204ENST00000457942 KNCNA6PVL3 124 aa11.51□□□□□ -0.57
CHCHD3-204ENST00000457942 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
CHCHD3-204ENST00000457942 A6NHS1 94 aa11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 CCR6P51684 374 aa11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 AP2S1P53680 142 aaPredicted RBP11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 YPEL3P61236 119 aaPredicted RBP11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 SRPXP78539 464 aa11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 TRPT1Q86TN4 253 aaKnown RBP11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 OR1S1Q8NH92 325 aa11.5□□□□□ -0.57
CHCHD3-204ENST00000457942 DTD1Q8TEA8 209 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms