RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 IGHV3-66A0A0C4DH42 116 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 LINC00854A0A1B0GVQ3 168 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 APOHP02749 345 aaPredicted RBP13.02□□□□□ -0.33
FAM3A-216ENST00000449971 SLC25A4P12235 298 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 RND2P52198 227 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 TIGITQ495A1 244 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 TCF24Q7RTU0 167 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 CENPSQ8N2Z9 138 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 GBGT1Q8N5D6 347 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 DTD1Q8TEA8 209 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 TMEM170AQ8WVE7 144 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 ST8SIA2Q92186 375 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 NDUFA13Q9P0J0 144 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 HSPB7Q9UBY9 170 aa13.02□□□□□ -0.33
FAM3A-216ENST00000449971 DUXBA0A1W2PPF3 345 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 CXorf65A6NEN9 183 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 SFT2D2O95562 160 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 NPPCP23582 126 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 PPP1R1AQ13522 171 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 RBMS2Q15434 407 aaKnown RBP13.01□□□□□ -0.33
FAM3A-216ENST00000449971 ODF3L2Q3SX64 289 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 PRSS54Q6PEW0 395 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 U3KQ87 197 aa13.01□□□□□ -0.33
FAM3A-216ENST00000449971 NAP1L6A6NFF2 107 aa13□□□□□ -0.33
FAM3A-216ENST00000449971 IGKV1-17P01599 117 aa13□□□□□ -0.33
FAM3A-216ENST00000449971 RPL11P62913 178 aaKnown RBP13□□□□□ -0.33
FAM3A-216ENST00000449971 PAFAH1B2P68402 229 aa13□□□□□ -0.33
FAM3A-216ENST00000449971 FAM90A2PQ658T7 463 aa13□□□□□ -0.33
FAM3A-216ENST00000449971 WFDC3Q8IUB2 231 aa13□□□□□ -0.33
FAM3A-216ENST00000449971 LILRB2Q8N423 598 aa13□□□□□ -0.33
FAM3A-216ENST00000449971 VSIRQ9H7M9 311 aa13□□□□□ -0.33
FAM3A-216ENST00000449971 DFFBO76075 338 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 IFNA4P05014 189 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 CD5P06127 495 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 OR10J1P30954 320 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 CMC4P56277 68 aaPredicted RBP12.99□□□□□ -0.33
FAM3A-216ENST00000449971 LRTM2Q8N967 370 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 OR1S2Q8NGQ3 325 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 Q8WTZ3 238 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 NPIPB3Q92617 1050 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 ACY3Q96HD9 319 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 METTL26Q96S19 204 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 TMEM231Q9H6L2 316 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 DNAH10Q8IVF4 4471 aa12.99□□□□□ -0.33
FAM3A-216ENST00000449971 A0A1W2PS18 150 aa12.98□□□□□ -0.33
FAM3A-216ENST00000449971 CENPXA8MT69 81 aa12.98□□□□□ -0.33
FAM3A-216ENST00000449971 DNASE2O00115 360 aaPredicted RBP12.98□□□□□ -0.33
FAM3A-216ENST00000449971 HOXB5P09067 269 aa12.98□□□□□ -0.33
FAM3A-216ENST00000449971 IGLC1P0CG04 106 aa12.98□□□□□ -0.33
FAM3A-216ENST00000449971 APRG1Q8IVJ8 170 aa12.98□□□□□ -0.33
FAM3A-216ENST00000449971 NARS2Q96I59 477 aaKnown RBP12.98□□□□□ -0.33
FAM3A-216ENST00000449971 SDHCQ99643 169 aaPredicted RBP12.98□□□□□ -0.33
FAM3A-216ENST00000449971 TMED3Q9Y3Q3 217 aa12.98□□□□□ -0.33
FAM3A-216ENST00000449971 PCLOQ9Y6V0 5065 aa12.97□□□□□ -0.33
FAM3A-216ENST00000449971 PITX3O75364 302 aa12.97□□□□□ -0.33
FAM3A-216ENST00000449971 NDUFB6O95139 128 aa12.97□□□□□ -0.33
FAM3A-216ENST00000449971 RPL35AP18077 110 aaKnown RBP12.97□□□□□ -0.33
FAM3A-216ENST00000449971 APOC4P55056 127 aa12.97□□□□□ -0.33
FAM3A-216ENST00000449971 YPEL3P61236 119 aaPredicted RBP12.97□□□□□ -0.33
FAM3A-216ENST00000449971 RPP25LQ8N5L8 163 aaKnown RBP12.97□□□□□ -0.33
FAM3A-216ENST00000449971 FLVCR2Q9UPI3 526 aa12.97□□□□□ -0.33
FAM3A-216ENST00000449971 IAPPP10997 89 aa12.96□□□□□ -0.33
FAM3A-216ENST00000449971 SLC25A6P12236 298 aa12.96□□□□□ -0.33
FAM3A-216ENST00000449971 CRYBB3P26998 211 aa12.96□□□□□ -0.33
FAM3A-216ENST00000449971 ATP5IP56385 69 aaPredicted RBP12.96□□□□□ -0.33
FAM3A-216ENST00000449971 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.33
FAM3A-216ENST00000449971 GGNBP1Q5YKI7 109 aa12.96□□□□□ -0.33
FAM3A-216ENST00000449971 OVOL2Q9BRP0 275 aa12.96□□□□□ -0.33
FAM3A-216ENST00000449971 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
FAM3A-216ENST00000449971 PAIP2BQ9ULR5 123 aaKnown RBP12.96□□□□□ -0.33
FAM3A-216ENST00000449971 C9orf170A2RU37 121 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 MED6O75586 246 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 RD3LP0DJH9 198 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 IL7P13232 177 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 ZNF124Q15973 351 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 STPG3Q8N7X2 389 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 MAGT1Q9H0U3 335 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 MAP6D1Q9H9H5 199 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 HECTD4Q9Y4D8 3996 aa12.95□□□□□ -0.34
FAM3A-216ENST00000449971 FAM90A26D6RGX4 464 aa12.94□□□□□ -0.34
FAM3A-216ENST00000449971 UBE2CO00762 179 aa12.94□□□□□ -0.34
FAM3A-216ENST00000449971 DEDDO75618 318 aa12.94□□□□□ -0.34
FAM3A-216ENST00000449971 GPX4P36969 197 aaPredicted RBP12.94□□□□□ -0.34
FAM3A-216ENST00000449971 P2RY1P47900 373 aa12.94□□□□□ -0.34
FAM3A-216ENST00000449971 RAB11AP62491 216 aa12.94□□□□□ -0.34
FAM3A-216ENST00000449971 STXBP6Q8NFX7 210 aa12.94□□□□□ -0.34
FAM3A-216ENST00000449971 C7orf50Q9BRJ6 194 aaKnown RBP12.94□□□□□ -0.34
FAM3A-216ENST00000449971 RYR1P21817 5038 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 KIR2DL5BA0A0G2JN68 375 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 KIR2DL5BA0A0G2JPC4 375 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 WRBO00258 174 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 SYNGR2O43760 224 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 ADAP1O75689 374 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 TOMM40O96008 361 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 IL4P05112 153 aa12.93□□□□□ -0.34
FAM3A-216ENST00000449971 HNRNPCP07910 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms