RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CACFD1Q9UGQ2 172 aa9.04□□□□□ -0.96
AC004540.1-204ENST00000449537 ZNF257Q9Y2Q1 563 aa9.04□□□□□ -0.96
AC004540.1-204ENST00000449537 A0A0B4J2A0 478 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 FCGR3BO75015 233 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 SNAPC5O75971 98 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 GIPP09681 153 aaPredicted RBP9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 NQO2P16083 231 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 VMA21Q3ZAQ7 101 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 FAM219AQ8IW50 185 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 LRTM2Q8N967 370 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 TMEM230Q96A57 120 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 SHPKQ9UHJ6 478 aa9.03□□□□□ -0.96
AC004540.1-204ENST00000449537 NACAE9PAV3 2078 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 IGHV3-35A0A0C4DH35 117 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 BOLA2-SMG1P6H3BVE0 249 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 GOSR2O14653 212 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 TNFSF12O43508 249 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 SFT2D2O95562 160 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 CRYZL1O95825 349 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 OR5AC1P0C628 307 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 PI3P19957 117 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 RAP2BP61225 183 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 RPL30P62888 115 aaKnown RBP9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 PPP1R1AQ13522 171 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 SERTAD4-AS1Q5TG53 156 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 LGI3Q8N145 548 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 RBPMSQ93062 196 aaKnown RBP9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 TMEM56Q96MV1 263 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 PDCD10Q9BUL8 212 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 ZNF436Q9C0F3 470 aaPredicted RBP9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 TMEM56-RWDD3S4R434 201 aa9.02□□□□□ -0.97
AC004540.1-204ENST00000449537 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 C9orf170A2RU37 121 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 MARCH11A6NNE9 402 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 CDS2O95674 445 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 C1QBP02746 253 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 UBE2KP61086 200 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 SUPT4H1P63272 117 aaKnown RBP9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 SYT8Q8NBV8 401 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 MITD1Q8WV92 249 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 ZNF503Q96F45 646 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 ST6GAL2Q96JF0 529 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 FAM210BQ96KR6 192 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 FANCD2OSQ96PS1 177 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 TP53RKQ96S44 253 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 BET1LQ9NYM9 111 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 CELA1Q9UNI1 258 aa9.01□□□□□ -0.97
AC004540.1-204ENST00000449537 C4BPBP20851 252 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 TFPI2P48307 235 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 AKR1C2P52895 323 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 KRTAP10-2P60368 255 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 CYCSP99999 105 aaKnown RBP9□□□□□ -0.97
AC004540.1-204ENST00000449537 FGL1Q08830 312 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 THOC7Q6I9Y2 204 aaKnown RBP9□□□□□ -0.97
AC004540.1-204ENST00000449537 GSG1LQ6UXU4 331 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 OR11H7Q8NGC8 314 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 GLYATL2Q8WU03 294 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 LSM10Q969L4 123 aaKnown RBP9□□□□□ -0.97
AC004540.1-204ENST00000449537 RRNAD1Q96FB5 475 aaKnown RBP9□□□□□ -0.97
AC004540.1-204ENST00000449537 HYLS1Q96M11 299 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 DAZ1Q9NQZ3 744 aaKnown RBP9□□□□□ -0.97
AC004540.1-204ENST00000449537 TMED3Q9Y3Q3 217 aa9□□□□□ -0.97
AC004540.1-204ENST00000449537 NPIPB5A8MRT5 1133 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 ZNF705EA8MWA4 302 aaPredicted RBP8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 PET100P0DJ07 73 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 SLC25A6P12236 298 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 HIST1H1BP16401 226 aaKnown RBP8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 MAS1LP35410 378 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 FAM3BP58499 235 aaPredicted RBP8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 OR2B11Q5JQS5 317 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 C10orf55Q5SWW7 151 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 C19orf35Q6ZS72 473 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 NOXA1Q86UR1 476 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 DMBX1Q8NFW5 382 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 RNASE11Q8TAA1 199 aaKnown RBP8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 CXorf58Q96LI9 332 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 ZNF430Q9H8G1 570 aaPredicted RBP8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 X6R8D5 127 aa8.99□□□□□ -0.97
AC004540.1-204ENST00000449537 NBDYA0A0U1RRE5 68 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 C5orf51A6NDU8 294 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 FAM25EA8MYX2 175 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 KBTBD11O94819 623 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 SAA1P0DJI8 122 aaPredicted RBP8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 GPR183P32249 361 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 LPAR6P43657 344 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 BRWD1-AS2P59051 145 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 TMEM41BQ5BJD5 291 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 TMEM268Q5VZI3 342 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 SSX9Q7RTT3 188 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 MMD2Q8IY49 270 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 PUSL1Q8N0Z8 303 aaKnown RBP8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 OR2T35Q8NGX2 323 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 TMEM167AQ8TBQ9 72 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 TMEM190Q8WZ59 177 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 SEC22AQ96IW7 307 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 FYTTD1Q96QD9 318 aaKnown RBP8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 OR2A7Q96R45 310 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 FKBP11Q9NYL4 201 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 MDFICQ9P1T7 246 aa8.98□□□□□ -0.97
AC004540.1-204ENST00000449537 PRNDQ9UKY0 176 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms