RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 KCNIP2Q9NS61 270 aa11.9□□□□□ -0.51
SF1-211ENST00000448404 TMEM242Q9NWH2 141 aa11.9□□□□□ -0.51
SF1-211ENST00000448404 ZNF257Q9Y2Q1 563 aa11.9□□□□□ -0.51
SF1-211ENST00000448404 ZNF320A2RRD8 509 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 PPP5D1E7EU14 171 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 F6UZH7 168 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 RAB31Q13636 194 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 PPIAL4CA0A0B4J2A2 164 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 PPIAL4GP0DN37 164 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 CDKN1AP38936 164 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 C2orf83Q53S99 150 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
SF1-211ENST00000448404 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 PDE6DO43924 150 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 CA1P00915 261 aaPredicted RBP11.88□□□□□ -0.51
SF1-211ENST00000448404 ORM2P19652 201 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 TCL1AP56279 114 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 ERHP84090 104 aaKnown RBP11.88□□□□□ -0.51
SF1-211ENST00000448404 SLC25A33Q9BSK2 321 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
SF1-211ENST00000448404 TOX4O94842 621 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 OR5G3P0C626 314 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 SFRP2Q96HF1 295 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 CTDSP1Q9GZU7 261 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
SF1-211ENST00000448404 IGKV1D-37A0A075B6S9 117 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 BATFQ16520 125 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 KLF17Q5JT82 389 aaPredicted RBP11.87□□□□□ -0.51
SF1-211ENST00000448404 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 TMEM186Q96B77 213 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 CD33P20138 364 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 USF1P22415 310 aaPredicted RBP11.87□□□□□ -0.51
SF1-211ENST00000448404 UQCRFS1P47985 274 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 OR5AU1Q8NGC0 362 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 POLQO75417 2590 aa11.87□□□□□ -0.51
SF1-211ENST00000448404 MYO18BQ8IUG5 2567 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 GRIFINA4D1Z8 144 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 ASCL2Q99929 193 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 POLR3KQ9Y2Y1 108 aaPredicted RBP11.86□□□□□ -0.51
SF1-211ENST00000448404 USP9XQ93008 2570 aaPredicted RBP11.86□□□□□ -0.51
SF1-211ENST00000448404 IGHV1-3A0A0C4DH29 117 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 DLL1O00548 723 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 CBLN1P23435 193 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 GNG5P63218 68 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 CENPWQ5EE01 88 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 Q71RC1 249 aaPredicted RBP11.86□□□□□ -0.51
SF1-211ENST00000448404 PDPNQ86YL7 162 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 SLC35E1Q96K37 410 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 SLC25A2Q9BXI2 301 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 ZNF355PQ9NSJ1 428 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 KAAG1Q9UBP8 84 aa11.86□□□□□ -0.51
SF1-211ENST00000448404 IGLC7A0M8Q6 106 aa11.85□□□□□ -0.51
SF1-211ENST00000448404 ZNF705FA8MVS1 300 aaPredicted RBP11.85□□□□□ -0.51
SF1-211ENST00000448404 IGLV1-47P01700 117 aa11.85□□□□□ -0.51
SF1-211ENST00000448404 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
SF1-211ENST00000448404 ZNF705DP0CH99 300 aaPredicted RBP11.85□□□□□ -0.51
SF1-211ENST00000448404 ZNF705BP0CI00 300 aaPredicted RBP11.85□□□□□ -0.51
SF1-211ENST00000448404 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
SF1-211ENST00000448404 BUB1B-PAK6H3BSN5 160 aa11.85□□□□□ -0.51
SF1-211ENST00000448404 NUPR1O60356 82 aa11.85□□□□□ -0.51
SF1-211ENST00000448404 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
SF1-211ENST00000448404 FAM167A-AS1Q96KT0 104 aa11.85□□□□□ -0.51
SF1-211ENST00000448404 PYGO2Q9BRQ0 406 aa11.85□□□□□ -0.51
SF1-211ENST00000448404 TIMM23O14925 209 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
SF1-211ENST00000448404 COA6Q5JTJ3 125 aaKnown RBP11.84□□□□□ -0.51
SF1-211ENST00000448404 C1orf194Q5T5A4 169 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 OR1B1Q8NGR6 318 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 KLRB1Q12918 225 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 PLGLAQ15195 96 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 VMA21Q3ZAQ7 101 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 ANKRD39Q53RE8 183 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 TMEM256Q8N2U0 113 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 RPEQ96AT9 228 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 IGSF10Q6WRI0 2623 aa11.84□□□□□ -0.51
SF1-211ENST00000448404 EAF1Q96JC9 268 aaPredicted RBP11.84□□□□□ -0.51
SF1-211ENST00000448404 SSBP3Q9BWW4 388 aaPredicted RBP11.84□□□□□ -0.51
SF1-211ENST00000448404 PSMB11A5LHX3 300 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 VENTXO95231 258 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 RANP62826 216 aaKnown RBP11.83□□□□□ -0.52
SF1-211ENST00000448404 TDRG1Q3Y452 100 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 OR10G8Q8NGN5 311 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 CLEC7AQ9BXN2 247 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 TECRQ9NZ01 308 aaKnown RBP11.83□□□□□ -0.52
SF1-211ENST00000448404 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 GGCTO75223 188 aaKnown RBP11.83□□□□□ -0.52
SF1-211ENST00000448404 LINC00311Q8N616 119 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 ANAPC16Q96DE5 110 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 DNAJC4Q9NNZ3 241 aa11.83□□□□□ -0.52
SF1-211ENST00000448404 HELTA6NFD8 242 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms